Pairwise Alignments

Query, 295 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score = 95.5 bits (236), Expect = 1e-24
 Identities = 69/258 (26%), Positives = 128/258 (49%), Gaps = 9/258 (3%)

Query: 5   ITLEALHILDAIERRGSFAAAANELNRAPSSLSYQIQKLEQDLDLMIFDRSGHRANFTEA 64
           I +EA  +L  +   GSF+ AA  L++A S++SYQ++KLEQ L + +F R  +RA  T  
Sbjct: 3   IDVEAFRVLSILVEEGSFSKAAERLHKAQSAVSYQVKKLEQHLGVKLFCRDQYRAELTPE 62

Query: 65  GKLILERGRAILAATEKLVNDATLLANGWELDITIALDGIVPAANLFPMVEALGNISK-- 122
           GK+IL  G+ +L     + + A+  + GWE  + + +DG +P   + P++ AL  +S+  
Sbjct: 63  GKVILAEGKRLLQYLGNIEHLASRFSEGWEPKLELVVDGSLP---MEPIMRALKRVSEHK 119

Query: 123 --TRVRIQDEILAGCWEALATGRADLLICPRIEALPQDVKAETIGTMKMIWVAAPTHYVH 180
             T++++  E L G         ADL++       P + + + +  +  I V + +H + 
Sbjct: 120 IPTKIQLNMEFLGGVQHRFERDNADLMLVKDYRTGP-NYRPQPLPDINSILVVSRSHPL- 177

Query: 181 RRSGEFNEEAREKYRAIAIADTAREQPAMSVNILQRQPRLTVSNLDAKCKALVAGLGIGT 240
            ++ E +     ++  + I D++  +               +S    K  AL+ GLG G 
Sbjct: 178 AKAKELSLFELLQHVELTIEDSSPGKIHSDELQFGGDKVFYLSGFIMKKNALLMGLGFGW 237

Query: 241 LPLQVAQPYIDKGELKAI 258
           +P  + Q  +  GEL+ +
Sbjct: 238 MPDFLIQEELASGELQEL 255