Pairwise Alignments

Query, 295 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score = 93.6 bits (231), Expect = 5e-24
 Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 13/293 (4%)

Query: 6   TLEALHILDAIERRGSFAAAANELNRAPSSLSYQIQKLEQDLDLMIFDRSGHRANFTEAG 65
           T E   IL A+   G +A AA +LN++ SSL++ + KL+  L + + +  G +A  TE+G
Sbjct: 7   TFEQWRILQAVVDCGGYAQAAEKLNKSQSSLNHAVAKLQTQLGVALLEVRGRKAYLTESG 66

Query: 66  KLILERGRAILAATEKLVNDATLLANGWELDITIALDGIVPAANLFPMVEALGNISK--- 122
           +++L R R I  +  +L   A+ L  GWE  + I+ + I P  +L   ++AL        
Sbjct: 67  EVLLRRSRHITRSVSELEQLASNLEKGWEPSLLISREMIYPMEHL---IDALAEFEPQGR 123

Query: 123 -TRVRIQDEILAGCWEALATGRADLLICPRIEALPQDVKAETIGTMKMIWVAAPTHYVHR 181
            TR+ I D +++G  E + +   DL I     A P+   A+ +  +    V  P+H +  
Sbjct: 124 GTRITILDSVISGSAELVESEAVDLAIIG--GAPPKGHLAQPLCNVDFHLVCHPSHPLAS 181

Query: 182 RSGEFNEEAREKYRAIAIADTAREQPAMSVNILQRQPRLTVSNLDAKCKALVAGLGIGTL 241
                +++   +   I I DT +      +  L+ + R TV+N       L  GLG   +
Sbjct: 182 MELPLDDQTLAEQLQIVIKDTGQIARG-ELGWLKAERRWTVANFHEALVVLSKGLGFCWI 240

Query: 242 PLQVAQPYIDKGELK--AIHGSEDLEMDIVLAW-RRNQMGEAKSWCIQYLKKN 291
           P  +    I +G L    + GS   ++ + L    R++ G A     Q + KN
Sbjct: 241 PSHLICDAIKEGRLTRLTLKGSSHRQVPLSLVIPNRDKQGPASQLLEQLILKN 293