Pairwise Alignments

Query, 295 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score = 84.7 bits (208), Expect = 2e-21
 Identities = 76/292 (26%), Positives = 136/292 (46%), Gaps = 16/292 (5%)

Query: 5   ITLEALHILDAIERRGSFAAAANELNRAPSSLSYQIQKLEQDLDLMIFDR-SGHRANFTE 63
           IT E L  + ++ + GSF+ AA EL  + ++++  IQ LE DL+L +F+R  G +   T+
Sbjct: 3   ITTERLQYIVSVAQHGSFSGAAKELGVSVAAVNKAIQHLEFDLELTLFERHGGKKPQLTQ 62

Query: 64  AGKLILERGRAILAATEKLVNDATLLANGWELDITIALDGIVPAANLFPMVEALGNISKT 123
            GK +  +   IL     +   A +++ G E  ++I L    P        + +G ++  
Sbjct: 63  EGKRLYVKALEILPKLIAMERQAQMMSEGIESQLSICLH---PYTCYPKYTQLIGELAAR 119

Query: 124 RVRIQDEILAG---CWEALATGRADLLICPRIEALPQDVKAETIGTMKMIWVAAPTH-YV 179
              ++  I+      W+ L   + D++I P   A  + V  +TI  +K + V+AP H   
Sbjct: 120 YPDLEINIVEAETLDWQNL---QCDIIIAPNRLANLRGVNIQTISRIKWLLVSAPQHPLA 176

Query: 180 HRRSGEFNEEAREKYRAIAIADTAREQPAMSVNILQRQPRLTVSNLDAKCKALVAGLGIG 239
             RS    E+    ++ +  A        + V +      +TV       + L+AG G  
Sbjct: 177 QLRSAPELEDFDHHHQLMPPAGNIILPHYLEV-MRYSSKLVTVERFYQLRELLLAGCGFA 235

Query: 240 TLPLQVAQPYIDKGELKAI---HGSEDLEMDIVLAWRRNQMGEAKSWCIQYL 288
             P  +AQP I++G+LK +   +G +     I L W+   +G+A +W I+ L
Sbjct: 236 MYPQALAQPLIEEGKLKDLNFDYGKQGNHWPIDLIWQEG-LGQAGNWFIEQL 286