Pairwise Alignments

Query, 295 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  175 bits (443), Expect = 1e-48
 Identities = 103/299 (34%), Positives = 161/299 (53%), Gaps = 11/299 (3%)

Query: 1   MLSPITLEALHILDAIERRGSFAAAANELNRAPSSLSYQIQKLEQDLDLMIFDRSGHRAN 60
           ML  I+L+ L +LDAI+++GSF+AAA  L R PS+L+Y +QKLE DL + +F+R G RA 
Sbjct: 1   MLPAISLDGLIVLDAIDKKGSFSAAAESLFRVPSALTYTVQKLESDLGVKLFERKGQRAE 60

Query: 61  FTEAGKLILERGRAILAATEKLVNDATLLANGWELDITIALDGIVPAANLFPMVEALGNI 120
            T  G+L+L +GR ILAAT +L      L  GWE  +T+A+D +VP   L  ++     +
Sbjct: 61  LTLVGQLVLRQGREILAATSRLEEAVRQLETGWESTLTLAIDTVVPGLPLLKLIAEFTEL 120

Query: 121 SK-TRVRIQDEILAGCWEALATGRADLLICPRIEALPQDVKAETIGTMKMIWVAAPTHYV 179
            K   + I +E L G W+AL +GRAD+ +    E          IG ++ ++  AP H +
Sbjct: 121 GKQVTINITEESLGGGWDALYSGRADIAVGVTGELPKGQYHLVEIGMLEFVFALAPNHPL 180

Query: 180 HRRSGEFNEEAREKYRAIAIADTAREQPAMSVNILQRQPRLTVSNLDAKCKALVAGLGIG 239
            +       EA  ++ ++ +AD++      S  +   +  + V N+  K KA   GLG+G
Sbjct: 181 AQFDHPIATEALLQFPSVVVADSSTALAQRSSGLFDSRQVIRVPNMQTKIKAQQLGLGVG 240

Query: 240 TLPLQVAQPYIDKGELKAIHGSEDLEMD-----IVLAWRRNQMGEAKSWCIQYLKK-NW 292
            LP  +    +  G L A      LE+      + LAWR+  +G+A++W  + L   NW
Sbjct: 241 YLPKHLIGEALAAGTLVAC----QLEIPRPAQAVFLAWRKGSLGKAQAWFAERLPHCNW 295