Pairwise Alignments

Query, 295 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  137 bits (345), Expect = 3e-37
 Identities = 84/286 (29%), Positives = 151/286 (52%), Gaps = 7/286 (2%)

Query: 8   EALHILDAIERRGSFAAAANELNRAPSSLSYQIQKLEQDLDLMIFDRSGHRANFTEAGKL 67
           +AL ++D + R GSF AAAN L++ PS++SY ++++E++L +++F+R       T AG  
Sbjct: 5   QALELIDIVARVGSFTAAANRLHKVPSAVSYAVKQIEEELGVVLFERHHRSVTLTPAGGH 64

Query: 68  ILERGRAILAATEKLVNDATLLANGWELDITIALDGIVPAANLFPMV-EALGNISKTRVR 126
            +++ R +L   +++      +ANGW+  ++IALD IV A  +  ++ +   +     + 
Sbjct: 65  FVKQARNLLTQIDEMKRGTQRVANGWQPTLSIALDNIVRADRISVLIADFYRHFHDIELI 124

Query: 127 IQDEILAGCWEALATGRADLLICPRIEALPQD--VKAETIGTMKMIWVAAPTHYVHRRSG 184
           I+ E+  G WEALATG +D+ I     A+P     + + +G ++  ++ +  H +     
Sbjct: 125 IRIEVFNGVWEALATGHSDVAI-GATTAIPVGGVFQYKDMGDIEWAFLVSKNHPLANIDR 183

Query: 185 EFNEEAREKYRAIAIADTAREQPAMSVNILQRQPRLTVSNLDAKCKALVAGLGIGTLPLQ 244
              +E    + +I + DT+RE P     +L+ Q RL V +          GLGIG +P+ 
Sbjct: 184 PLTDEELRPFPSICLEDTSREIPKRMTWLLENQRRLVVPDWIRAINCFREGLGIGYMPVH 243

Query: 245 VAQPYIDKGEL--KAIHGSEDLEMDIVLAWRRNQMGEAKSWCIQYL 288
           +A  +I  G L  K +   + L     LAW  ++M  A +W + YL
Sbjct: 244 LASVFIKAGALVEKQLENPK-LTSPCCLAWNADKMSPALAWVLDYL 288