Pairwise Alignments

Query, 295 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 94.4 bits (233), Expect = 3e-24
 Identities = 67/258 (25%), Positives = 124/258 (48%), Gaps = 9/258 (3%)

Query: 5   ITLEALHILDAIERRGSFAAAANELNRAPSSLSYQIQKLEQDLDLMIFDRSGHRANFTEA 64
           I ++A ++L  +   GSFA AA  L++A S++SYQ++KLE+ L + +F R  +RA  T  
Sbjct: 3   IDIDAFNVLQVLVEEGSFAKAAERLHKAQSAVSYQVKKLEEHLGVQLFSRDQYRAELTSE 62

Query: 65  GKLILERGRAILAATEKLVNDATLLANGWELDITIALDGIVPAANLFPMVEALGNISK-- 122
           G++IL  G+ +L     + + A+  + GWE  + + +DG +P   + P++ AL  +++  
Sbjct: 63  GRVILAEGQRLLQHLANIEHLASRFSEGWEPKLELVIDGALP---MEPIMTALKRMAEHQ 119

Query: 123 --TRVRIQDEILAGCWEALATGRADLLICPRIEALPQDVKAETIGTMKMIWVAAPTHYVH 180
             T++++  E L G         ADL++       P     + +  +  + VA+  H + 
Sbjct: 120 IPTKIQLNMEFLGGVQHRFERDNADLMLVKDYRTGPY-YHPQPLPAITSVLVASALHPLA 178

Query: 181 RRSGEFNEEAREKYRAIAIADTAREQPAMSVNILQRQPRLTVSNLDAKCKALVAGLGIGT 240
                 +    +++  + I D++  +               +S    K  AL+ GLG G 
Sbjct: 179 SLK-RISLSELQQHVELTIEDSSPNKSYRDELQFGGDKVFYLSGFIMKKNALLKGLGFGW 237

Query: 241 LPLQVAQPYIDKGELKAI 258
           LP  + Q  +  GEL  I
Sbjct: 238 LPDFLVQEELLSGELVEI 255