Pairwise Alignments

Query, 295 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 94.7 bits (234), Expect = 2e-24
 Identities = 71/261 (27%), Positives = 130/261 (49%), Gaps = 4/261 (1%)

Query: 5   ITLEALHILDAIERRGSFAAAANELNRAPSSLSYQIQKLEQDLDLMIFDRSGHRANFTEA 64
           +TLE L + + +   GS  AA+++L++   ++S  I++LE  LD+++FDR G+R   T+ 
Sbjct: 1   MTLEQLLMFNTVALAGSLKAASDKLHKTQPAISQSIKQLESQLDVVLFDRQGYRLALTQE 60

Query: 65  GKLILERGRAILAATEKLVNDATLLANGWELDITIALDGIVPAANLFPMVEALG-NISKT 123
           G+ +L+  + +L   +++   A  LA G E  IT+A +     A + PM+E        T
Sbjct: 61  GRKLLQYAQRVLNEAQEMRQVAKHLAIGNEASITLAFEASFNLARILPMLERTQLEFPHT 120

Query: 124 RVRIQDEILAGCWEALATGRADLLI-CPRIEALPQD-VKAETIGTMKMIWVAAPTHYVHR 181
           ++ ++ E L G  EAL  G+AD+ I    IE++  +  +   + +  ++ VA+P      
Sbjct: 121 QIILKQEYLTGALEALNQGKADIAISAGGIESMRSNHFELGFLFSGSLLDVASPRLLSRY 180

Query: 182 RSGEFNEEAREKYRAIAIADTAREQPAMSVNILQRQPRLTVSNLDAKCKALVAGLGIGTL 241
            S    +E   +Y+ I I DT      +   +   Q R  V++   K   + +G+G G L
Sbjct: 181 PSLSHVKELVNEYQ-IVIQDTGTGTANIEFGVQAGQRRWYVNDFYTKKMLIQSGMGWGKL 239

Query: 242 PLQVAQPYIDKGELKAIHGSE 262
           P  + +  +  G L  +   E
Sbjct: 240 PYYMVEEALANGSLHPLELKE 260