Pairwise Alignments

Query, 295 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., DNA-binding transcriptional activator AllS from Klebsiella michiganensis M5al

 Score = 99.4 bits (246), Expect = 9e-26
 Identities = 75/284 (26%), Positives = 133/284 (46%), Gaps = 7/284 (2%)

Query: 1   MLSPITLEALHILDAIERRGSFAAAANELNRAPSSLSYQIQKLEQDLDLMIFDRSGHRAN 60
           ML P   E L    ++   GSF+ AA +L +  +++SY+I+ LE +  + +F R+     
Sbjct: 1   MLDP---ETLRTFVSVAESGSFSRAAEKLYKTTATISYRIKLLEDNTGVALFSRTTRSVL 57

Query: 61  FTEAGKLILERGRAILAATEKLVNDATLLANGWELDITIALDGIV--PAANLFPMVEALG 118
            T AG  +L + R  L   + +  +   + +G E  + I ++ ++  P A    +     
Sbjct: 58  LTPAGMHLLAQAREWLGWIDSMPGELQQINDGVERQVNIVVNNLMYDPQAIARLLAWLSQ 117

Query: 119 NISKTRVRIQDEILAGCWEALATGRADLLI-CPRIEALPQDVKAETIGTMKMIWVAAPTH 177
               T+     +I  G W+ L      L I     E L +++    +G +  ++V +P H
Sbjct: 118 RYPFTQFHFSRQIYMGVWDTLLHDDFSLAIGVTGTEPLGENIAVTPLGEVSWLFVMSPHH 177

Query: 178 YVHRRSGEFNEEAREKYRAIAIADTAREQPAMSVNILQRQPRLTVSNLDAKCKALVAGLG 237
            + ++S   +E    +Y A+ I D+AR         L  Q  + V +++ K  A +AG+G
Sbjct: 178 PLGQQSDPLSEAQLRRYPAVNIEDSARRLTKRVAWRLPGQKEIVVPDIETKIAAHIAGVG 237

Query: 238 IGTLPLQVAQPYIDKGELKAIH-GSEDLEMDIVLAWRRNQMGEA 280
           IG LP  + QP I +GEL A    +      + LAWR++  G+A
Sbjct: 238 IGFLPEPLCQPLIARGELIARQIPAMRPPSPLSLAWRKDHHGKA 281