Pairwise Alignments

Query, 295 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., putative DNA-binding transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  140 bits (353), Expect = 4e-38
 Identities = 85/293 (29%), Positives = 157/293 (53%), Gaps = 7/293 (2%)

Query: 1   MLSPITLEALHILDAIERRGSFAAAANELNRAPSSLSYQIQKLEQDLDLMIFDRSGHRAN 60
           M + ++ +AL ++D + R GSF AAAN L++ PS++SY ++++E++L +++F+R      
Sbjct: 1   MSAMLSEQALELIDIVARVGSFTAAANRLHKVPSAVSYAVKQIEEELGVVLFERHHRSVT 60

Query: 61  FTEAGKLILERGRAILAATEKLVNDATLLANGWELDITIALDGIVPAANLFPMV-EALGN 119
            T AG+  +++ R +L   +++      +ANGW+  ++IALD IV A  +  ++ +   +
Sbjct: 61  LTPAGEHFVKQARNLLTQMDEMKRGTQRVANGWQPTLSIALDNIVRADRISVLIADFYRH 120

Query: 120 ISKTRVRIQDEILAGCWEALATGRADLLICPRIEALPQD--VKAETIGTMKMIWVAAPTH 177
                + I+ E+  G WEALATGR+D+ I     A+P     + + +G ++  ++ +  H
Sbjct: 121 FQDIELIIRIEVFNGVWEALATGRSDIAI-GATTAIPVGGVYQYKDMGDIQWAFLVSKNH 179

Query: 178 YVHRRSGEFNEEAREKYRAIAIADTAREQPAMSVNILQRQPRLTVSNLDAKCKALVAGLG 237
            +        ++    + +I + DT+RE P     +L+ Q RL V +          GLG
Sbjct: 180 PLASIDRPLTDDELRPFPSICLEDTSREIPKRMTWLLENQRRLVVPDWIRAINCFREGLG 239

Query: 238 IGTLPLQVAQPYIDKGEL--KAIHGSEDLEMDIVLAWRRNQMGEAKSWCIQYL 288
           IG +P+ +A  +I  G L  K +   + L     LAW  ++M  A +W + YL
Sbjct: 240 IGYMPVHLASVFIKAGALVEKQLENPK-LTSPCCLAWNADKMSPALAWVLDYL 291