Pairwise Alignments

Query, 295 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score = 87.4 bits (215), Expect = 3e-22
 Identities = 82/301 (27%), Positives = 138/301 (45%), Gaps = 33/301 (10%)

Query: 6   TLEALHILDAIERRGSFAAAANELNRAPSSLSYQIQKLEQDLDLMIFDRSGHRANFTEAG 65
           TL +L IL A    GSF+AAA +L +A S +S  I  LE DLDL +F+R+G     T+AG
Sbjct: 4   TLGSLKILIAAAETGSFSAAARKLGKAQSVVSTTISNLEIDLDLTLFERTGRYPQLTQAG 63

Query: 66  KLILERGRAILAATEKLVNDATLLANGWELDITIALDG----------IVPAANLFPMVE 115
             I++    +LA +++L   A  LA+G E  +T+A+D           +   A  FPMVE
Sbjct: 64  VRIVQEAEVLLAQSQRLQAIAGELASGVETRLTLAIDDDSHLPWLGSLLEHFATRFPMVE 123

Query: 116 ALGNISKTRVRIQDEILAGCWEALATGRADLLICPRIEALPQDVKAETIGTMKMIWVAAP 175
                    + +   ++    + L TGRA L IC + E   +++   T+G + M  V + 
Sbjct: 124 ---------LELLFPLMEDVTDLLLTGRAQLGICYKNENPHREIVTYTLGEVAMPIVVST 174

Query: 176 THYVHRRSGEFNEEAREKYRAIAIA----DTAREQPAMSVNILQRQPRLTVSNLDAKCKA 231
            H + R+    NE   +  R + +      + R++  +S  +   +  L V         
Sbjct: 175 EHPLARKQ-PLNEIDLQGSRQLLVTGRREGSERQRFRLSAQVWWVEGDLGVMEF------ 227

Query: 232 LVAGLGIGTLPLQVAQPYIDKGELKAIHGS--EDLEMDIVLAWRRN-QMGEAKSWCIQYL 288
           +  GLG   +P  + Q  + + E+  +         + + L W R   +G+A  W  + L
Sbjct: 228 VKRGLGWAAIPAFLIQEALARQEVVVLESDLISRHALTLELQWHRALALGQAGRWLKETL 287

Query: 289 K 289
           +
Sbjct: 288 Q 288