Pairwise Alignments

Query, 334 a.a., D-alanine--D-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., D-alanine--D-alanine ligase (EC 6.3.2.4) from Pseudomonas fluorescens FW300-N2E2

 Score =  102 bits (254), Expect = 1e-26
 Identities = 95/321 (29%), Positives = 136/321 (42%), Gaps = 36/321 (11%)

Query: 6   ILLLCGGGSSEHEISLVSANYIQQQLELTPEFHVIRVEMKKEGWFSEQGALVYLDTNSAT 65
           + +L GG S+E E+SL S N + Q L+                     G  V  D     
Sbjct: 20  VAVLFGGKSAEREVSLKSGNAVLQALQ--------------SAGVDAFGIDVGDDFLQRL 65

Query: 66  LNSDKASYPIDFVVPCIHGFPGETGDIQSMLELAGIPYLGCGPEASANSFNKITSKLWYD 125
           LN       ID     +HG  GE G +Q +LE  GIPY G G  ASA + +K+ +K  + 
Sbjct: 66  LNEK-----IDRAFIILHGRGGEDGSMQGLLECLGIPYTGSGILASALAMDKLRTKQVWH 120

Query: 126 ALDIPNTPYLFLTQNTPSSIDKAKQAFGHWGSIFVKAARQGSSVGCYKVTTEDQIAPAIE 185
           +L IP   +  L     S  D    A      + VK A +GSS+G  KV +  ++  A +
Sbjct: 121 SLGIPTPRHAVLA----SEADCISAATELGFPLIVKPAHEGSSIGMAKVNSLPELTAAWK 176

Query: 186 AAFGFSEQVLVEQAVKPRELEVSAYEMNGKLYISKPGEVIAPEGTFYSYEEKYSANSHAR 245
            A  +  QVLVEQ +   E  ++            P   +    TFY Y+ KY AN    
Sbjct: 177 DASSYDSQVLVEQWISGPEFTIATLRDQ-----VLPPIALGTPHTFYDYDAKYVANDTQY 231

Query: 246 TV---LEAENLTEKHKELIQTYAERVFIHMKLRHLSRIDFFLTQEGQIYLNEVNTFPGMT 302
            +   L+A     K KEL+   A +    + +    R D     +GQ +  EVNT PGMT
Sbjct: 232 RIPCGLDA----AKEKELMDLTA-KACEALGIAGWGRADVMQDADGQFWFLEVNTAPGMT 286

Query: 303 PISMFPKMLEHNGHRFSEFLV 323
             S+ P      G  F + ++
Sbjct: 287 DHSLVPMAARAAGLDFQQLVL 307