Pairwise Alignments

Query, 334 a.a., D-alanine--D-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., D-alanine--D-alanine ligase from Pseudomonas stutzeri RCH2

 Score =  108 bits (269), Expect = 2e-28
 Identities = 91/330 (27%), Positives = 145/330 (43%), Gaps = 40/330 (12%)

Query: 6   ILLLCGGGSSEHEISLVSANYIQQQLELTPEFHVIRVEMKKEGWFSEQGALVYLDTNSAT 65
           + +L GG S+E E+SL S   +   L+                   E G   +       
Sbjct: 16  VAVLFGGKSAEREVSLKSGAAVLAALQ-------------------EAGVDAFGIDAGDD 56

Query: 66  LNSDKASYPIDFVVPCIHGFPGETGDIQSMLELAGIPYLGCGPEASANSFNKITSKLWYD 125
           L    ++ PID     +HG  GE G +Q +LE AGIPY G G  ASA + +K+ +K  + 
Sbjct: 57  LLQRLSNEPIDRAFIVLHGRGGEDGSMQGLLECAGIPYTGSGILASALAMDKLRTKQVWQ 116

Query: 126 ALDIPNTPYLFLTQNTPSSIDKAKQAFGHWGSIFVKAARQGSSVGCYKVTTEDQIAPAIE 185
           +L +P   +  L   +      A +  G    + VK A +GSS+G  KV    ++  A  
Sbjct: 117 SLGLPTPQHAVLA--SEGDCRAAAETLGF--PLIVKPAHEGSSIGMAKVGALAELIDAWR 172

Query: 186 AAFGFSEQVLVEQAVKPRELEVSAYEMNGKLYISKPGEVIAPEG-----TFYSYEEKYSA 240
           AA  +  QVLVEQ ++  E  V+             G+V+ P G     +FY Y+ KY A
Sbjct: 173 AASSYDSQVLVEQWIQGPEFTVAVLH----------GQVLPPIGLGTPHSFYDYDAKYLA 222

Query: 241 NSHARTVLEAENLTEKHKELIQTYAERVFIHMKLRHLSRIDFFLTQEGQIYLNEVNTFPG 300
           +     +     L    ++ ++  + R    + +R  +R+D      G  +L EVNT PG
Sbjct: 223 SDTQYRI--PCGLDAAREDELKALSARACEAVGIRGWARVDVMQDAAGNFWLLEVNTVPG 280

Query: 301 MTPISMFPKMLEHNGHRFSEFLVQCVTNTL 330
           MT  S+ P      G  F + ++  + ++L
Sbjct: 281 MTDHSLVPMAARAAGLDFQQLVLSILDDSL 310