Pairwise Alignments

Query, 334 a.a., D-alanine--D-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., D-alanine--D-alanine ligase from Pseudomonas syringae pv. syringae B728a

 Score = 99.4 bits (246), Expect = 1e-25
 Identities = 93/330 (28%), Positives = 152/330 (46%), Gaps = 40/330 (12%)

Query: 6   ILLLCGGGSSEHEISLVSANYIQQQLELTPEFHVIRVEMKKEGWFSEQGALVYLDTNSAT 65
           + +L GG S+E  +SL S N +   L          +E   + +  + G     D     
Sbjct: 21  VAVLFGGKSAERAVSLNSGNAVLGAL----------LEAGVDAFGIDVG-----DDFLQR 65

Query: 66  LNSDKASYPIDFVVPCIHGFPGETGDIQSMLELAGIPYLGCGPEASANSFNKITSKLWYD 125
           L S+K    ID     +HG  GE G +Q +LE   IPY G G  ASA + +K+ +K  + 
Sbjct: 66  LVSEK----IDRAFIVLHGRGGEDGTMQGLLECLEIPYTGSGVLASALAMDKLRTKQVWQ 121

Query: 126 ALDIPNTPYLFLTQNTPSSIDKAKQAFGHWGSIFVKAARQGSSVGCYKVTTEDQIAPAIE 185
           +L +  TP   + +N    I  A +       + VK A +GSS+G  KV + D++  A +
Sbjct: 122 SLGLA-TPAHAVLENESDCICAATEL---GLPLIVKPAHEGSSIGMAKVNSVDELIAAWK 177

Query: 186 AAFGFSEQVLVEQAVKPRELEVSAYEMNGKLYISKPGEVIAPEG-----TFYSYEEKYSA 240
           AA  +  QVLVEQ ++  E  V+          S  G+V+ P G     +FY Y+ KY A
Sbjct: 178 AASTYDSQVLVEQWIQGPEFTVA----------SLRGQVLPPIGLGTPHSFYDYDAKYLA 227

Query: 241 NSHARTVLEAENLTEKHKELIQTYAERVFIHMKLRHLSRIDFFLTQEGQIYLNEVNTFPG 300
           +     +     L +  ++ ++  A R    + +   +R D     +G+ +L EVNT PG
Sbjct: 228 SDTQYRI--PCGLGDAQEQELKQLAARACDAIGIAGWARTDVMQDAQGKFWLLEVNTVPG 285

Query: 301 MTPISMFPKMLEHNGHRFSEFLVQCVTNTL 330
           MT  S+ P      G  F + ++  + +++
Sbjct: 286 MTDHSLVPMAARAAGLDFQQLVLAILADSV 315