Pairwise Alignments

Query, 334 a.a., D-alanine--D-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., D-alanine--D-alanine ligase from Pseudomonas syringae pv. syringae B728a

 Score =  145 bits (367), Expect = 1e-39
 Identities = 113/357 (31%), Positives = 176/357 (49%), Gaps = 33/357 (9%)

Query: 3   KTTILLLCGGGSSEHEISLVSANYIQQQLELTPEFHVIRVEMKKEG-WFSEQGALVYLD- 60
           K ++ ++ GG SSEHE+SL SA  +   ++    + +  + + K G W     A   L+ 
Sbjct: 2   KKSVAIVFGGQSSEHEVSLQSARNVINAID-RERYALTLIGVDKLGRWLHFDEADYLLNA 60

Query: 61  TNSATLNSDKASYP-----------------------IDFVVPCIHGFPGETGDIQSMLE 97
           T+ A +    +  P                       ID V P IHG  GE G +Q +L 
Sbjct: 61  TDPARIKLSASGKPLSLLPGSIGGQFVDVESGQPLAAIDVVFPLIHGAFGEDGALQGLLR 120

Query: 98  LAGIPYLGCGPEASANSFNK-ITSKLWYDALDIPNTPYLFLTQNTPSSIDKAKQAFGHWG 156
           +  +P++G    +SA   +K +T +L  DA  I   P+  L++    S  +A    G   
Sbjct: 121 MLSVPFVGADVLSSAACMDKDVTKRLLRDA-GIAVAPFRVLSRGESLSFTEAADQLGL-- 177

Query: 157 SIFVKAARQGSSVGCYKVTTEDQIAPAIEAAFGFSEQVLVEQAVKPRELEVSAYEMNGKL 216
            +FVK A QGSSVG  KV+ E   A A+   F F  ++L+EQ +  RE+E +    N   
Sbjct: 178 PMFVKPANQGSSVGVSKVSDEAGFAAALALGFEFDHKLLIEQGIVGREVECAVLG-NFDA 236

Query: 217 YISKPGEVIAPEGTFYSYEEKYSANSHARTVLEAENLTEKHKELIQTYAERVFIHMKLRH 276
            +S  GEVIA +  FY+Y+ KY     AR  + AE L     + ++  A + +  +    
Sbjct: 237 QVSVCGEVIAND-EFYAYDTKYLNGDQARIAIPAE-LPADLSDQVRDVALQAYKVLGCAG 294

Query: 277 LSRIDFFLTQEGQIYLNEVNTFPGMTPISMFPKMLEHNGHRFSEFLVQCVTNTLVNA 333
           LSR+DFF+T+   I +NEVNT PG T ISM+PK+ + +G  ++E + + +   L  A
Sbjct: 295 LSRVDFFVTEGRDIIINEVNTLPGFTSISMYPKLWQASGLSYAELIHRLIVLALERA 351