Pairwise Alignments

Query, 334 a.a., D-alanine--D-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., D-alanyl-alanine synthetase A (RefSeq) from Shewanella amazonensis SB2B

 Score =  343 bits (880), Expect = 4e-99
 Identities = 166/329 (50%), Positives = 226/329 (68%), Gaps = 3/329 (0%)

Query: 1   MTKTTILLLCGGGSSEHEISLVSANYIQQQLELTPEFHVIRVEMKKEGWF-SEQGALVYL 59
           M K  ++LLCGGG SEH+ISL+SA Y +  L   P F+ + +E+  EG F + +G +V L
Sbjct: 1   MNKYNLVLLCGGGGSEHDISLLSAKYFESCLATLPRFNTLWLELTAEGQFRTREGEIVEL 60

Query: 60  DTNSATLNSDKASYP--IDFVVPCIHGFPGETGDIQSMLELAGIPYLGCGPEASANSFNK 117
                   +D+A  P  +D+V+PCIHG+PGETGDIQS   L  +PY GCG EAS+N FNK
Sbjct: 61  TNRREIRFADEAKAPWSVDYVIPCIHGYPGETGDIQSWFNLIRLPYFGCGSEASSNCFNK 120

Query: 118 ITSKLWYDALDIPNTPYLFLTQNTPSSIDKAKQAFGHWGSIFVKAARQGSSVGCYKVTTE 177
           IT+K+W+ AL IPNTPYL+L + +  +I + + AF  WGS+F+KAA QGSSVGC+     
Sbjct: 121 ITAKMWFSALGIPNTPYLYLDEPSNDAIARVEAAFDEWGSVFIKAASQGSSVGCFPAHRR 180

Query: 178 DQIAPAIEAAFGFSEQVLVEQAVKPRELEVSAYEMNGKLYISKPGEVIAPEGTFYSYEEK 237
           + I   +  AF ++  V+VE+ +K RELEV+ Y+  G++  ++PGE++    TFYS+EEK
Sbjct: 181 EDIPGLVRKAFEYAPFVVVEKTIKARELEVAVYDYQGEIVATRPGEIVCAANTFYSFEEK 240

Query: 238 YSANSHARTVLEAENLTEKHKELIQTYAERVFIHMKLRHLSRIDFFLTQEGQIYLNEVNT 297
           Y   S A T +EA ++ E+    I+ YA R F  MKLRHLSRIDFFLT++ QI LNE+NT
Sbjct: 241 YDTKSQAVTHVEAPDVDEETVAAIRDYALRAFKGMKLRHLSRIDFFLTEDNQILLNEINT 300

Query: 298 FPGMTPISMFPKMLEHNGHRFSEFLVQCV 326
           FPG+T ISMFPKML H+GH F+ FL Q +
Sbjct: 301 FPGLTQISMFPKMLAHHGHDFATFLEQAI 329