Pairwise Alignments

Query, 334 a.a., D-alanine--D-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., D-alanine--D-alanine ligase (NCBI) from Rhodospirillum rubrum S1H

 Score = 88.2 bits (217), Expect = 2e-22
 Identities = 80/261 (30%), Positives = 120/261 (45%), Gaps = 20/261 (7%)

Query: 76  DFVVPCIHGFPGETGDIQSMLELAGIPYLGCGPEASANSFNKITSKLWYDALDIPNTPYL 135
           D V   +HG  GE G IQ +L++  +PY   G  ASA + +K ++KL ++   IP  P++
Sbjct: 59  DVVFNALHGRFGEDGAIQGILDIMALPYTHSGRLASAIAMDKPSAKLVFERFAIPVAPHV 118

Query: 136 FLTQNTPSSIDKAKQAFGHWGSIFVKAARQGSSVGCYKVTTEDQIAPAIEAAFGFSEQVL 195
              + +  +     + +       VK   QGSSVG   VT+E    P     + +  QV+
Sbjct: 119 VADRASVLAETAMARPY------VVKPLDQGSSVGVTIVTSETNDLPFSRDDWPYGRQVM 172

Query: 196 VEQAVKPRELEVSAYEMNGK-LYISKPGEVIAPEGTFYSYEEKYSANSHARTVLEAENLT 254
           VE+ +  REL V    M  K L +++    I  +  FY Y+ KY A   +R ++ A    
Sbjct: 173 VERFIPGRELTVGV--MGDKALGVTE----IVTDHRFYDYDAKY-AQGGSRHIVPAPVAP 225

Query: 255 EKHKELIQTYAERVFIHMKL--RHLSRIDFFLTQEGQIYLNEVNTFPGMTPISMFPKMLE 312
           E      Q     V  H  L  R +SR D     E  +Y+ EVNT PGMT  S+ P+   
Sbjct: 226 E---VFAQAQELSVLAHQALGCRGVSRADLRFDGE-TLYMLEVNTQPGMTDTSLVPEQAL 281

Query: 313 HNGHRFSEFLVQCVTNTLVNA 333
           H G  F + +   V     +A
Sbjct: 282 HAGISFPDLVTWLVETAQCDA 302