Pairwise Alignments

Query, 334 a.a., D-alanine--D-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 328 a.a., D-alanine--D-alanine ligase A from Pedobacter sp. GW460-11-11-14-LB5

 Score =  141 bits (356), Expect = 2e-38
 Identities = 97/333 (29%), Positives = 160/333 (48%), Gaps = 12/333 (3%)

Query: 3   KTTILLLCGGGSSEHEISLVSANYIQQQLELTPEFH-VIRVEMKKEGWFSE--QGALVYL 59
           K TI LL GG + E  +S+ SA  I Q ++  P+ + V ++ + ++GWF E      + +
Sbjct: 2   KKTIALLTGGTTGEWVVSVKSAATIAQNID--PDLYDVYKIMLNEKGWFYEPADSVKIEI 59

Query: 60  DTNSATLNSDKASYPIDFVVPCIHGFPGETGDIQSMLELAGIPYLGCGPEASANSFNKIT 119
           D N  +L  +      D V   IHG PGE G +Q   ++ GIPY  C    S+ + NK  
Sbjct: 60  DKNDFSLTLEGRKIKFDGVFIAIHGSPGEDGKLQGYFDMLGIPYTACDALTSSITMNKGY 119

Query: 120 SKLWYDALD-IPNTPYLFLTQNTPSSIDKAKQAFGHWGSIFVKAARQGSSVGCYKVTTED 178
           +K   + ++ +     + + +    ++++ KQ        FVK    GSS+G  KV   D
Sbjct: 120 TKAVVEGINNLYTAKSVQIFKGGNHNLNQIKQDLRL--PYFVKPNSGGSSIGMSKVKHAD 177

Query: 179 QIAPAIEAAFGFSEQVLVEQAVKPRELEVSAYEMNGKLYISKPGEVIAPEGTFYSYEEKY 238
            +  A+E AF    Q+L+E+ V  RE  +  +   GK+ +    EVI P   F+ +E KY
Sbjct: 178 DLEEAVEKAFKEDTQILIEEFVSGREFSIGVFGAEGKIIVLPTTEVI-PANEFFDFEAKY 236

Query: 239 SANSHARTVLEAENLTEKHKELIQTYAERVFIHMKLRHLSRIDFFLTQ-EGQIYLNEVNT 297
           +    A   +    + E+    +Q   + V+  +  R + R+D+FL +  G+ Y  E+NT
Sbjct: 237 TPG--ATEEITPGRMNEEELSRVQQVVKDVYKKLNCRGVVRVDYFLEEGTGKFYFIEINT 294

Query: 298 FPGMTPISMFPKMLEHNGHRFSEFLVQCVTNTL 330
            PG T  S  P+ +   G    EF  + +  TL
Sbjct: 295 IPGQTATSFIPQQVAAMGITLKEFYTRLMKETL 327