Pairwise Alignments

Query, 334 a.a., D-alanine--D-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., D-alanine-D-alanine ligase from Marinobacter adhaerens HP15

 Score =  112 bits (281), Expect = 1e-29
 Identities = 95/329 (28%), Positives = 150/329 (45%), Gaps = 30/329 (9%)

Query: 6   ILLLCGGGSSEHEISLVSANYIQQQLELTPEFHVIRVEMKKEGWFSEQGALVYLDTNSAT 65
           + +  GG S+E E+SL S   +   L ++       V+++        G L+    N   
Sbjct: 22  VAVFMGGDSAEREVSLKSGKAVLAAL-VSAGVDAFAVDVR--------GCLLRTVDNP-- 70

Query: 66  LNSDKASYPIDFVVPCIHGFPGETGDIQSMLELAGIPYLGCGPEASANSFNKITSKLWYD 125
                     D V   +HG  GE G +Q++L  AGIPY G    ASA + +K+ +K  ++
Sbjct: 71  --------DFDRVFIALHGRGGEDGTLQAILSQAGIPYTGSDVLASALAMDKLRTKYVFE 122

Query: 126 ALDIPNTPYLFLTQNTPSSIDKAKQAFGHW-GSIFVKAARQGSSVGCYKVTTEDQIAPAI 184
              +P   +      T S  D+A+Q        + VK +R+GSS+G  KV T  ++A A 
Sbjct: 123 GCGLPTPKF-----RTMSGADQAEQIIDELRAPLSVKPSREGSSIGIRKVHTAAELAHAY 177

Query: 185 EAAFGFSEQVLVEQAVKPRELEVSAYEMNGKLYISKPGEVIAPEGTFYSYEEKYSANSHA 244
           EAA      VLVE+ ++  E  VS  +      +   G   + E  FY YE KY A+   
Sbjct: 178 EAAAALDNLVLVEEWIEGPEFTVSLLQDRA---LPAIGLSASTEHVFYDYEAKYLADDTR 234

Query: 245 RTVLEAENLTEKHKELIQTYAERVFIHMKLRHLSRIDFFLTQEGQIYLNEVNTFPGMTPI 304
             +     L  + +  +Q  A   F  +  R   R+D     +G+ +L EVNT PGMT  
Sbjct: 235 YRI--PCGLAPEDEVRLQHLALEAFRVVGCRTWGRVDIMQDSDGKFWLLEVNTVPGMTDH 292

Query: 305 SMFPKMLEHNGHRFSEFLVQCVTNTLVNA 333
           S+ P   +  G  F E +V+ + ++L +A
Sbjct: 293 SLVPMAAKAAGISFEELVVRILKDSLEDA 321