Pairwise Alignments

Query, 388 a.a., conjugal transfer protein TraF from Vibrio cholerae E7946 ATCC 55056

Subject, 436 a.a., hypothetical protein from Enterobacter sp. TBS_079

 Score =  171 bits (432), Expect = 5e-47
 Identities = 129/424 (30%), Positives = 206/424 (48%), Gaps = 54/424 (12%)

Query: 6   LSVGFSLVLTSPLAFSANYAVEARGDAMGGVGVVSGNFLTGPFYNPALVAIYRRNDDAGM 65
           +S+  SL + +  A +AN   E+R DAMGG GV +GN+ +G   NPAL+A  + +DD  +
Sbjct: 10  VSIAVSLFMANQ-AGAANTWTESRSDAMGGTGVAAGNYGSGALINPALLAKAKPDDDVTV 68

Query: 66  ILPSIGLSYNDPNDLITDLDKVSDIINQSSKGDYSN----------IGELNK-------- 107
           ILPS G+   D ++L  ++D ++D IN   K    N          +G +N+        
Sbjct: 69  ILPSAGVQVTDEDNLQDEIDTINDKINH-YKDVVDNLTPIEIITNPLGSINQFQGAAKDL 127

Query: 108 --SLTAMQGDVLNAELGGVVAFAIPNQFISANVFGKAYTESFVSPIIDSRVCADDLCELE 165
              L  ++G    A  G  +A +IPN  +S     K Y    VS  ID +   D L  ++
Sbjct: 128 ADELDYLKGKTARATAGAGIAVSIPNDVLSVAFMAKGYAHGRVSSSIDQQ-DIDYLRGIQ 186

Query: 166 RAKA------------------SSVNAVSVG----ITELGITLAKYQTFLGQHIAFGITP 203
           R+ A                   ++N+ + G    +++ GI +A+     G  ++ G+TP
Sbjct: 187 RSDAVAAGVALDAALNGTDQITKNLNSTASGRAAIVSDYGIAVARQFELGGVPVSVGVTP 246

Query: 204 KLQRVYTYVYEASLNSYDIKDLRDN--GNGETIFNMDAGALWFYGP-IRIGFAANNLISR 260
           KLQ+ + Y Y  S+  YD     D+     +T FN+DAG    +G    +G +  NL+SR
Sbjct: 247 KLQKTWVYNYTTSIYDYDSNKWNDSRYRTDDTGFNVDAGIAADFGEHWTVGVSGQNLMSR 306

Query: 261 EIKTK--TITSAVSGNPISY--SYDMKPQYTVGAGIVADYFTLSVDYDLNEEERYKDFKD 316
           +I TK   I +  +G  +SY  +Y ++P  T GA    D  TL+ D DL E + +K  +D
Sbjct: 307 DIDTKDIRIRNGRTGEVVSYKDTYQIRPLVTAGAAWHNDLVTLTADGDLTETKGFKS-ED 365

Query: 317 NTQMIRVGGEIDIMRQLKLRAGYNKNLAYDNTEGTVTAGIGLSPLNLFQLDLGASYTNEN 376
            +Q + VG E+  +  L +RAG+  ++   N     T G+G +P N   +DL   Y  + 
Sbjct: 366 TSQYVGVGAEVTPLNWLAVRAGFRADMK-GNDSNVFTGGVGFAPFNTVHVDLMGLYGEDE 424

Query: 377 AMGA 380
             GA
Sbjct: 425 TWGA 428