Pairwise Alignments

Query, 218 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 232 a.a., sensor histidine kinase from Pseudomonas fluorescens FW300-N2E2

 Score =  133 bits (335), Expect = 2e-36
 Identities = 84/221 (38%), Positives = 123/221 (55%), Gaps = 8/221 (3%)

Query: 4   TLLLVEDDKNLADGLLVSLEQAGYDCLHAETIAD--VKQHWDKADLVILDRQLPDGDSVQ 61
           TLL+++D+  +   L +SL   GY  L A T  +   +   +K DL+ILD  LPD D  Q
Sbjct: 6   TLLVIDDEPQIRKFLRISLSSQGYKVLEAGTGVEGLAQAALNKPDLLILDLGLPDMDGQQ 65

Query: 62  HLMDWKKIKDIPVILLTALVTVKDKVTGLDAGANDYLTKPFAEAELFARIRAQLRSPDSG 121
            L ++++   +PV++L+   +   KV  LD GANDY+TKPF   E  ARIRA LR   +G
Sbjct: 66  VLREFRQWSTVPVLVLSVRASEAQKVEALDNGANDYVTKPFGIQEFLARIRALLRQAPAG 125

Query: 122 Q-DDSKVVTSNLTIDKATREVFFNGESITLTRTEFDLLLFLASNLGRVFTRDELLDHVWG 180
           +  ++ +    LT+D A R V  +G  ++LTR E+ +L  LA + GRV T+ +LL  +WG
Sbjct: 126 EPQEAALKFGPLTVDLAYRRVLLDGSEVSLTRKEYAVLAQLARHPGRVITQQQLLKDIWG 185

Query: 181 YNHFPTTRTVDTHVLQLRQKLPG-----LEIETLRGVGYKM 216
             H   +  +   V  LRQKL         I T  GVGY++
Sbjct: 186 PTHTEDSHYLRIVVGHLRQKLADDPTRPRFIVTEAGVGYRL 226