Pairwise Alignments

Query, 218 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 255 a.a., two component transcriptional regulator, winged helix family from Synechococcus elongatus PCC 7942

 Score =  130 bits (328), Expect = 2e-35
 Identities = 89/233 (38%), Positives = 127/233 (54%), Gaps = 22/233 (9%)

Query: 1   MKQTLLLVEDDKNLADGLLVSLEQAGYDCLHA----ETIADVKQHWDKADLVILDRQLPD 56
           +K+ +L+V+D+  +   L + L  AGY  + A    E +A  +Q  +  DL++LD  LP 
Sbjct: 12  LKEKILVVDDEAAVRRILTMRLSMAGYQVVVASDGHEALAMFEQ--EAPDLIVLDVMLPK 69

Query: 57  GDSVQHLMDWKKIKDIPVILLTALVTVKDKVTGLDAGANDYLTKPFAEAELFARIRAQLR 116
            D      + +K+ D+P+I+L+AL  + D++TGLD GA+DYL KPF+  EL ARI   LR
Sbjct: 70  LDGYGVCRELRKLSDVPIIMLSALGDIADRITGLDLGADDYLPKPFSPKELEARIATILR 129

Query: 117 SPDSGQDDSKVVT-------SNLTIDKATREVFFNGESITLTRTEFDLLLFLASNLGRVF 169
             D   +     +       S++ ID   R+VF  GE + LT TEF LL  L    GRV 
Sbjct: 130 RLDDSPNALSAPSSPGVLRISDVEIDTNRRQVFQRGERVPLTYTEFSLLELLFRQPGRVV 189

Query: 170 TRDELLDHVWGY--NHFPTTRTVDTHVLQLRQKL------PGLEIETLRGVGY 214
            R E+L+ +WGY        R VD +V +LR KL      P L I T+RG GY
Sbjct: 190 PRAEILEELWGYPPRRNADLRVVDVYVARLRSKLEADPRNPEL-IITVRGTGY 241