Pairwise Alignments

Query, 218 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 233 a.a., Two component Transcriptional regulator, Winged helix family (NCBI) from Rhodospirillum rubrum S1H

 Score =  130 bits (326), Expect = 3e-35
 Identities = 84/227 (37%), Positives = 125/227 (55%), Gaps = 13/227 (5%)

Query: 1   MKQTLLLVEDDKNLADGLLVSLEQAGYDCLHA----ETIADVKQHWDKADLVILDRQLPD 56
           MK  +L+VED+ +L   L  +LE+ GY    A    E +  V +  D+ D+VILD  LP 
Sbjct: 1   MKSHVLIVEDEVSLVTLLRYNLEKEGYRVSEAMDGEEAMTLVAE--DQPDVVILDWMLPS 58

Query: 57  GDSVQ---HLMDWKKIKDIPVILLTALVTVKDKVTGLDAGANDYLTKPFAEAELFARIRA 113
              ++    L    + +D+P+++LTA     D++ GL+ GA+DY++KPF+  EL AR++A
Sbjct: 59  LSGIEVCRQLRRKPRTRDLPILMLTARGEESDRIRGLNTGADDYMSKPFSMPELLARVKA 118

Query: 114 QLRSPDSGQDDSKVVTSNLTIDKATREVFFNGESITLTRTEFDLLLFLASNLGRVFTRDE 173
            LR          +  S++ +D     V   G  I L  TEF LL FL  N G VF+R+E
Sbjct: 119 LLRRAQPTSAKGTLSYSDVVMDLGAHRVTRGGRYIHLGPTEFRLLQFLMQNPGAVFSREE 178

Query: 174 LLDHVWGYNHFPTTRTVDTHVLQLRQKLPGLE----IETLRGVGYKM 216
           LL+ VWG + +   RTVD H+ +LR+ L G      I T+R  GY +
Sbjct: 179 LLNAVWGPDIYVEPRTVDVHIRRLRKALNGEASTDLIRTVRAAGYAL 225