Pairwise Alignments

Query, 218 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 233 a.a., envelope stress response regulator transcription factor CpxR from Rahnella sp. WP5

 Score =  131 bits (329), Expect = 1e-35
 Identities = 83/226 (36%), Positives = 121/226 (53%), Gaps = 14/226 (6%)

Query: 5   LLLVEDDKNLADGLLVSLEQAGYDCLHAETIADVKQHWDKA-DLVILDRQLPDGDSVQHL 63
           +LLV+DD+ L   L   LE  G++ + A       +  D   DL++LD  +P  + ++ L
Sbjct: 4   ILLVDDDRELTSLLKELLEMEGFNVVVAYDGEQALEKIDNTIDLLLLDVMMPKKNGIETL 63

Query: 64  MDWKKIKDIPVILLTALVTVKDKVTGLDAGANDYLTKPFAEAELFARIRAQLR------- 116
            + ++    PVI+LTA  +  D+V GL+ GA+DYL KPF + EL ARIRA LR       
Sbjct: 64  KELRQRHQTPVIMLTARGSELDRVLGLELGADDYLPKPFNDRELVARIRAMLRRSNWSEQ 123

Query: 117 -SPDSGQDDSKVVTSNLTIDKATREVFFNGESITLTRTEFDLLLFLASNLGRVFTRDELL 175
              +       +    L ++   +E  FNGE++ LT TEF LL  LA +LG+V +R+ L 
Sbjct: 124 QQTNENNGSPTLEVDGLQLNPGRQEASFNGEALDLTGTEFTLLYLLAKHLGQVVSREHLS 183

Query: 176 DHVWGYNHFPTTRTVDTHVLQLRQKLPGLE-----IETLRGVGYKM 216
             V G    P  R +D H+  LR+KLP  +      +TLRG GY M
Sbjct: 184 QEVLGKRLTPFDRAIDMHISNLRRKLPDRQDGHPWFKTLRGRGYLM 229