Pairwise Alignments

Query, 218 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 235 a.a., response regulator with CheY-like receiver domain and winged-helix DNA-binding domain from Dechlorosoma suillum PS

 Score =  130 bits (326), Expect = 3e-35
 Identities = 84/220 (38%), Positives = 121/220 (55%), Gaps = 8/220 (3%)

Query: 5   LLLVEDDKNLADGLLVSLEQAGYDCLHAETIAD--VKQHWDKADLVILDRQLPDGDSVQH 62
           +++VED+  +   +  +LE  G     A+T A   ++    K DL++LD  LPDGD V  
Sbjct: 14  VVIVEDEPQIRRFVRAALESEGCTVWEADTAARGLIEAGTRKPDLLVLDLGLPDGDGVDL 73

Query: 63  LMDWKKIKDIPVILLTALVTVKDKVTGLDAGANDYLTKPFAEAELFARIRAQLRSPDSGQ 122
           + D +    +PV++L+A     DKV  LDAG +DYLTKPF   EL AR+RA LR    G 
Sbjct: 74  IRDLRNWSGVPVLVLSARSDESDKVAALDAGGDDYLTKPFGIPELLARVRALLRRAGRGG 133

Query: 123 DDSKVVT-SNLTIDKATREVFFNGESITLTRTEFDLLLFLASNLGRVFTRDELLDHVWGY 181
           D   V     + +D A R+V  +GE++ LT  E+ LL  L +N GRV T  +LL  VWG 
Sbjct: 134 DMPPVFAFGPVEVDLARRQVSRHGEAVHLTPIEYRLLSQLVANAGRVLTHRQLLREVWGP 193

Query: 182 NHFPTTRTVDTHVLQLRQKL---PGL--EIETLRGVGYKM 216
           +H      +  ++  LR+KL   P +   I T  GVGY++
Sbjct: 194 SHVEHAHYLRVYMAGLRRKLEDDPAMPRHILTESGVGYRL 233