Pairwise Alignments

Query, 218 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 227 a.a., response regulator with CheY-like receiver domain and winged-helix DNA-binding domain from Dechlorosoma suillum PS

 Score =  133 bits (335), Expect = 2e-36
 Identities = 84/215 (39%), Positives = 125/215 (58%), Gaps = 7/215 (3%)

Query: 5   LLLVEDDKNLADGLLVSLEQAGY--DCLHAETIADVKQHWDKADLVILDRQLPDGDSVQH 62
           +LL EDDK +ADGL  SL Q GY  DC +    AD     +  DL+ILD  LP    ++ 
Sbjct: 3   ILLAEDDKIIADGLSRSLRQGGYAVDCAYTGLEADTALMTNSYDLLILDLGLPKLPGLEV 62

Query: 63  LMDWK-KIKDIPVILLTALVTVKDKVTGLDAGANDYLTKPFAEAELFARIRAQLRSPDSG 121
           L   + +   +PV++LTAL    D+V GLD GA+DY+ KPF  AEL AR+RA  R   S 
Sbjct: 63  LKRLRARNVQLPVLILTALDGTGDRVKGLDLGADDYMAKPFELAELEARVRALTRR--SS 120

Query: 122 QDDSKVVTSNLTIDKATREVFFNGESITLTRTEFDLLLFLASNLGRVFTRDELLDHVWGY 181
                +    LT D+A R    +G+++ L+  E  LL  L S +GR+ ++D+L+DH+ G+
Sbjct: 121 GTAPVITCGALTYDQAGRVAQLDGQNLDLSARELGLLEILLSRVGRLVSKDQLVDHLCGW 180

Query: 182 NHFPTTRTVDTHVLQLRQKLP--GLEIETLRGVGY 214
               +   ++ ++ +LR+KL   G+ I T+RG+GY
Sbjct: 181 GEEVSHNAIEVYIHRLRKKLESGGVRIATVRGLGY 215