Pairwise Alignments

Query, 218 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 238 a.a., DNA-binding response regulator from Klebsiella michiganensis M5al

 Score =  137 bits (344), Expect = 2e-37
 Identities = 89/229 (38%), Positives = 133/229 (58%), Gaps = 15/229 (6%)

Query: 1   MKQTLLLVEDDKNLADGLLVSLEQAGYDCLHAETIADVKQHWDKA--DLVILDRQLPDGD 58
           M + +LLVEDD+++A  L ++L   GY  +H    A      +K   D VILD  LP  D
Sbjct: 1   MAKKILLVEDDEDIAALLRLNLLDEGYQIVHVADGAQALSLLEKELWDAVILDLMLPGVD 60

Query: 59  SVQHLMDWKK-IKDIPVILLTALVTVKDKVTGLDAGANDYLTKPFAEAELFARIRAQLRS 117
            ++     ++  + +PVI+++A  +   +V GL+ GA+DYL KPF+  EL AR++A  R 
Sbjct: 61  GLEICRRIRQQTRYLPVIIISARASETQRVQGLEMGADDYLAKPFSILELTARVKAVFRR 120

Query: 118 PDS-GQ----DDSKVVTSNLTIDKATREVFFNGESITLTRTEFDLLLFLASNLGRVFTRD 172
            ++ GQ    D  ++ +  L+ID  +R+V   GE++ LT  EFDLL + A + G VF+R 
Sbjct: 121 QEAMGQNLLMDAGRIASHGLSIDPLSRDVKLRGETVDLTPREFDLLYYFARHPGEVFSRL 180

Query: 173 ELLDHVWGYNHFPTTRTVDTHVLQLRQKL------PGLEIETLRGVGYK 215
           ELLD VWGY H     TV+TH+ +LR K+      P + I T+ G GYK
Sbjct: 181 ELLDRVWGYQHDGYEHTVNTHINRLRTKIERDPAEPDI-ILTVWGKGYK 228