Pairwise Alignments

Query, 218 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 229 a.a., DNA-binding response regulator from Klebsiella michiganensis M5al

 Score =  139 bits (350), Expect = 4e-38
 Identities = 80/229 (34%), Positives = 131/229 (57%), Gaps = 13/229 (5%)

Query: 1   MKQTLLLVEDDKNLADGLLVSLEQAGYDCLHAE----TIADVKQHWDKADLVILDRQLPD 56
           M + +L+VED+  + + +   LEQ G+  + AE     +  + + W   DL++LD  LP 
Sbjct: 1   MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDFDSAVNQLNEPWP--DLILLDWMLPG 58

Query: 57  GDSVQHLMDWKK---IKDIPVILLTALVTVKDKVTGLDAGANDYLTKPFAEAELFARIRA 113
           G  +Q +   K+    +DIPV++LTA    +D+V GL+ GA+DY+TKPF+  EL ARI+A
Sbjct: 59  GSGLQFIKQLKREAMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKA 118

Query: 114 QLRSPDSGQDDSKVVTSNLTIDKATREVFFNGESITLTRTEFDLLLFLASNLGRVFTRDE 173
            +R       +  +    L++D ++  V      + +  TEF LL F  ++  RV++R++
Sbjct: 119 VMRRISPMAVEEVIEMQGLSLDPSSHRVMTGENPLDMGPTEFKLLHFFMTHPERVYSREQ 178

Query: 174 LLDHVWGYNHFPTTRTVDTHVLQLRQKLP----GLEIETLRGVGYKMKA 218
           LL+HVWG N +   RTVD H+ +LR+ L        ++T+RG GY+  A
Sbjct: 179 LLNHVWGTNVYVEDRTVDVHIRRLRKALEHSGHDRMVQTVRGTGYRFSA 227