Pairwise Alignments

Query, 218 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., two component transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  128 bits (322), Expect = 7e-35
 Identities = 83/217 (38%), Positives = 127/217 (58%), Gaps = 9/217 (4%)

Query: 5   LLLVEDDKNLADGLLVSLEQAGYDCLHA----ETIADVKQHWDKADLVILDRQLPDGDSV 60
           ++LVED++ LA G+ +SL + G    H     + +  +K     A  ++LD  LPDG+  
Sbjct: 3   IMLVEDNELLAQGICLSLAKMGMQVDHLSSYQQALVGIKNETFSA--IVLDLGLPDGNGK 60

Query: 61  QHLMDWK-KIKDIPVILLTALVTVKDKVTGLDAGANDYLTKPFAEAELFARIRAQLRSPD 119
           + L  W+ +   IP I+LTA      K+  LD GA+DYL KPF   EL ARIRA +R   
Sbjct: 61  ELLKAWRAEGVSIPTIVLTANTDFDTKLECLDIGADDYLGKPFDVRELAARIRAIVRR-Q 119

Query: 120 SGQDDSKVVTSNLTIDKATREVFFNGESITLTRTEFDLLLFLASNLGRVFTRDELLDHVW 179
            G D++ +    L+ID  TREV F  +++ L+R EF LLL LA + GRV TR++L    +
Sbjct: 120 YGLDNNSLNIGALSIDLNTREVSFRDQNVPLSRREFQLLLELAQSAGRVLTRNQLEQLTY 179

Query: 180 GYNHFPTTRTVDTHVLQLRQKLPGLEIETLRGVGYKM 216
           G++    + +++ H+  LR+KL    I+T+RG+GY +
Sbjct: 180 GWDEV-GSNSIEVHIHHLRKKLANDLIKTVRGIGYTL 215