Pairwise Alignments

Query, 499 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 803 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score = 51.6 bits (122), Expect = 1e-10
 Identities = 64/237 (27%), Positives = 98/237 (41%), Gaps = 35/237 (14%)

Query: 285 KRQEMRSRMLILQILTHELRTPIAS----LSLTVEGFRREFEHLPESLYDEFRRLCEDSR 340
           KR E   R  I  + +HELRTP+ S    L L       E   +PE++++      ++S+
Sbjct: 567 KRIERLQREFISTV-SHELRTPLTSITGALGLICSNVMGE---VPEAMHELLDIAQQNSQ 622

Query: 341 RLRQLAEASKDYLQSDSKPLASDWVPSVEEWLQYKVEEEFSGN--------VTLKLNQ-- 390
           RL  L +   D L  D           + + LQ ++E     N        V L+L    
Sbjct: 623 RLNALID---DLLDMDKLHAGKMRFALLRQPLQPQLELALRSNRNYAEQHGVVLQLGACP 679

Query: 391 DIAAKLNVYWLGTCVDNLLRNAVKYGVA--PVTLEVITQTNLVTFKVTDQGSLTHRDWRH 448
            +  +++   L   + NLL NA K+  A   V L        V   V D+G     D+R 
Sbjct: 680 AVTVEIDAMRLQQVLSNLLSNAAKFSPAGEQVELSATLSDGRVRISVRDRGPGISADFRE 739

Query: 449 -LRKPFVS--------KSGLGLGLTIVESMVGRMGGKMSLEGPP---TTFILEIPCE 493
            + + F          + G GLGL I + ++ RMGG++  E  P     F  E+P E
Sbjct: 740 RVFQKFAQADSSDSRQQGGTGLGLAISKELIERMGGQIGFESEPGHGACFWFELPSE 796