Pairwise Alignments

Query, 499 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 977 a.a., periplasmic sensor hybrid histidine kinase from Synechococcus elongatus PCC 7942

 Score = 52.0 bits (123), Expect = 1e-10
 Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 29/228 (12%)

Query: 290 RSRMLILQILTHELRTPIASLSLTVEGFRREFEH--LPESLYDEFRRLCEDSRRLRQLAE 347
           +++   L  ++HELRTP+ ++    E    E E     E L  +FR++    + L +L  
Sbjct: 476 QAKSAFLANMSHELRTPLNAIIGYSEMMMEEAEDGIEVEELLPDFRKINNAGKHLLELIN 535

Query: 348 ASKD-----------YLQSDSKPLASDWVPSVEEWLQYKVEEEFSGNVTLKLNQDIAAKL 396
           +  D           YL+S S P   + V S+ + L  K + +   +    +    A   
Sbjct: 536 SILDLSKIEAGRMELYLESFSLPELINGVKSIIKPLIEKNQNQLLVDCPADIGLMTA--- 592

Query: 397 NVYWLGTCVDNLLRNAVKYG-VAPVTLEVITQTNLVTFKVTDQG-SLTHRDWRHLRKPFV 454
           +V  L   + NLL NA K+     + L+V  Q + V FKV D G  ++      + + F 
Sbjct: 593 DVTKLRQTLLNLLSNASKFTHQGTIQLQVAAQGDQVVFKVVDSGIGMSPEQIDRIFEAFA 652

Query: 455 SKS--------GLGLGLTIVESMVGRMGGKMSLE---GPPTTFILEIP 491
                      G GLGL+I    +  MGGK+++E   G  +TF + +P
Sbjct: 653 QADDSTTRKFGGTGLGLSISRHFIEMMGGKITVESVLGEGSTFTITLP 700