Pairwise Alignments

Query, 499 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 517 a.a., HAMP domain-containing sensor histidine kinase from Parabacteroides merdae CL09T00C40

 Score = 50.1 bits (118), Expect = 2e-10
 Identities = 66/261 (25%), Positives = 114/261 (43%), Gaps = 42/261 (16%)

Query: 262 SMIILV--IANIFLVLGWSGYRWNSKRQEMRSRML--ILQILTHELRTPIASLSLTVEGF 317
           S+I+LV  I  I++V           RQ+  S M    +  +THEL+TP++++SL  +  
Sbjct: 264 SLILLVTFIFTIYIVF----------RQKRLSEMKNDFINNMTHELKTPVSTISLAAQML 313

Query: 318 RRE--------FEHLPESLYDEFRRLCEDSRRLRQLAEASKDYLQSDSKPL-ASDWVPSV 368
           +          F+H+   + DE +RL     ++ Q++   +       K + A+D + SV
Sbjct: 314 KDSDITKSPDVFKHISGVINDETKRLGFLVEKVLQMSLFERQKAALKLKEVDANDLLASV 373

Query: 369 EEWLQYKVEEEFSGNVTLKLN-QDIAAKLNVYWLGTCVDNLLRNAVKYGVAPVTLEVITQ 427
                 KV E++ G + + L  +D    ++   +   + NLL NAVKY    V L ++ +
Sbjct: 374 ANTFALKV-EKYDGTIDIDLQAEDSDIYVDEMHITNVLFNLLDNAVKYRRLEVPLTLMCR 432

Query: 428 T----NLVTFKVTDQGSLTHRDW------RHLRKP---FVSKSGLGLGLT----IVESMV 470
           T      +   + D G    +++      R  R P        G GLGL     IVE   
Sbjct: 433 TWNENGKLLISIEDNGIGIKKEYLKKVFDRFFRVPTGNVHDVKGFGLGLAYVRKIVEDHK 492

Query: 471 GRMGGKMSLEGPPTTFILEIP 491
           G +  ++      T FI+ +P
Sbjct: 493 GTIRAEVGTGNVGTKFIITLP 513