Pairwise Alignments

Query, 412 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., GGDEF domain protein from Pseudomonas fluorescens FW300-N2E2

 Score =  202 bits (514), Expect = 2e-56
 Identities = 132/377 (35%), Positives = 207/377 (54%), Gaps = 19/377 (5%)

Query: 44  LPYILFLIALTVAHIFKQSRIAMVAMTMLLAYWLIQIRLQ----TPLTVNSTMLELIMLS 99
           LP ++ L+      ++++ R   + +T+ +AY+L+  +               +   ++ 
Sbjct: 51  LPTLVLLLGGAYCAVYRRQRELFLMVTVYIAYFLLDTQTDFYRDNGKVREDAAVVFHLVC 110

Query: 100 LLLPVACFLPYAYKNAGLFSKSFLSYLAILLLFIFWAWLTQ--------LHIGETDHSSL 151
           LLLP+   L  A++      +  ++  A+LL+F   A   +        L + E    +L
Sbjct: 111 LLLPLLFGLFAAWQERTHLFQDMVARFAVLLVFGSVALALEQSYPQALLLWLSEIRWPAL 170

Query: 152 TEGIFFVVPQISRLPLVVVAYLVALAGIAAISVLTRNQILDVVVYSSIVLSMNAFVLFHV 211
             G +  + Q+S  P+   A+L+ LA     +    +    V V     +    F+L   
Sbjct: 171 -HGAWMSLIQLS-YPMFAAAFLL-LAWQYWRNPRPLHAAQLVGVLGLFWMLPKTFIL--- 224

Query: 212 PYISTIMFTLSGLLILVYLISAGYEMAFNDPLTQIPGRQALDQDLKHIGRKFTLAMLDVD 271
           P+   IM +   L+I   +    Y+MAF D LT +PGR+AL++ ++ +GR + LAM DVD
Sbjct: 225 PFTLNIMCSQVMLMIAAAVAHEAYQMAFRDELTGLPGRRALNERMQRLGRNYVLAMSDVD 284

Query: 272 HFKKFNDTYGHDTGDDVLRLVASRLREINGKARVYRYGGEEFSIIYKGKLAKEVLPFIEA 331
           HFKKFNDT+GHD GD VLRLVAS+L +I G  R YRYGGEEF++++ GK   E +P +E 
Sbjct: 285 HFKKFNDTHGHDVGDQVLRLVASKLSKIGGGGRAYRYGGEEFALVFAGKTIDECMPHLEV 344

Query: 332 LRQDIESYELVIRDTNQRPKSHAEGAKKRSRKSNSDIVTITISIGVCDSELYRHPIEALK 391
           +RQ IE+Y + +R+ + RP+   +G ++RS    S  V++T+SIGV +    R P E LK
Sbjct: 345 IRQSIETYAIQLRNPDSRPQDDQQGRQRRSGAGASS-VSVTVSIGVAERLEQRTPEEVLK 403

Query: 392 AADGALYKAKQAGRNCV 408
           +AD ALY AK AGRNCV
Sbjct: 404 SADQALYNAKGAGRNCV 420