Pairwise Alignments

Query, 412 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., diguanylate cyclase (GGDEF domain) with PAS/PAC sensor from Pseudomonas fluorescens FW300-N2E2

 Score = 90.5 bits (223), Expect = 6e-23
 Identities = 68/213 (31%), Positives = 96/213 (45%), Gaps = 36/213 (16%)

Query: 207 VLFHVPYISTIMFTLSGLLILVYLISAGYEMAFNDPLTQIPGRQALDQDLK-------HI 259
           V++ V  ++T    L      + L+S+       D LT +  R   + DLK         
Sbjct: 130 VIYDVTDVATNRHQLQAANAQLQLLSS------TDRLTGLYNRGHWESDLKAAYARHQRY 183

Query: 260 GRKFTLAMLDVDHFKKFNDTYGHDTGDDVLRLVASRLRE-INGKARVYRYGGEEFSIIYK 318
           G   +L MLD+DHFK+ NDTYGH  GD V+  VA  LRE       V RYGGEEF ++  
Sbjct: 184 GHALSLVMLDIDHFKRVNDTYGHQAGDKVIEQVARLLREHARDSDVVGRYGGEEFGVVLS 243

Query: 319 GKLAKEVLPFIEALRQDIESYELVIRDTNQRPKSHAEGAKKRSRKSNSDIVTITISIGVC 378
              +     F E +R  +E+ E++                      N   +  TIS+GV 
Sbjct: 244 DTDSSGAHAFAERMRHSVEALEVLY---------------------NDQTIRFTISLGVA 282

Query: 379 D-SELYRHPIEALKAADGALYKAKQAGRNCVKV 410
           D S+      + +  AD ALY +K+ GRN V V
Sbjct: 283 DLSQPSNDHADLIARADQALYTSKKTGRNRVTV 315