Pairwise Alignments

Query, 412 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 432 a.a., GGDEF domain protein from Pseudomonas syringae pv. syringae B728a

 Score =  193 bits (491), Expect = 7e-54
 Identities = 126/380 (33%), Positives = 212/380 (55%), Gaps = 23/380 (6%)

Query: 44  LPYILFLIALTVAHIFKQSRIAMVAMTMLLAYWLIQIRLQTPLTVNSTMLELIML----S 99
           LP ++ L+      ++++ R   + +T+ +AY+L+  +            +  ++     
Sbjct: 42  LPTLVLLLGGAYCCVYRRQRELFLMLTVYIAYYLLDTQTDYYRDHGKVREDAAVIFHLVC 101

Query: 100 LLLPVACFLPYAYKNAGLFSKSFLSYLAILLLF------IFWAWLTQLHIGETDHSSLTE 153
           LLLP+   L  A++      +  ++ LA+L+        +  ++  +L +   D      
Sbjct: 102 LLLPLLFGLYAAWEERTHLFQDMIARLAVLVALGGVAVGLEQSYPVELQVWLAD------ 155

Query: 154 GIFFVVPQISRLPLVVVAYLVALA--GIAAISVLTRNQILDVVVYSSIVLSMNAFV-LFH 210
            I + V   + + L+ ++Y + L   G+     L + + L       ++  + A    F 
Sbjct: 156 -IRWPVLHGAWMSLIQLSYAMFLVSFGVLIWQYLEKPRPLHAAQIVGLLGLLWALPKTFI 214

Query: 211 VPYISTIMFTLSGLLILVYLISAGYEMAFNDPLTQIPGRQALDQDLKHIGRKFTLAMLDV 270
           +P+   I+ +   L+I   +    Y+MAF D LT +PGR+AL++ ++ +GR + LAM DV
Sbjct: 215 LPFTLNILCSQVMLMIAAAVAHEAYQMAFRDELTGLPGRRALNERMQRLGRNYVLAMSDV 274

Query: 271 DHFKKFNDTYGHDTGDDVLRLVASRLREI-NGKARVYRYGGEEFSIIYKGKLAKEVLPFI 329
           DHFKKFNDT+GHD GD VLRLVAS+L +I NG  + YRYGGEEF+I++  K   E +P +
Sbjct: 275 DHFKKFNDTHGHDVGDQVLRLVASKLSKITNGGGKAYRYGGEEFAIVFAAKSIDECMPHL 334

Query: 330 EALRQDIESYELVIRDTNQRPKSHAEGAKKRSRKSNSDIVTITISIGVCDSE-LYRHPIE 388
           EA+R+ I SYE+ +R+ + RP+   +G ++RS  + +  V++T+SIGV + +  +R P E
Sbjct: 335 EAIRETIASYEIQLRNKDNRPQDDQQGRQRRS-GAQAGSVSVTVSIGVAERQPEHRTPEE 393

Query: 389 ALKAADGALYKAKQAGRNCV 408
            LK+AD ALY AK AGRNCV
Sbjct: 394 VLKSADQALYAAKGAGRNCV 413