Pairwise Alignments

Query, 412 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 397 a.a., GGDEF domain protein from Pseudomonas syringae pv. syringae B728a

 Score = 86.7 bits (213), Expect = 1e-21
 Identities = 93/391 (23%), Positives = 166/391 (42%), Gaps = 72/391 (18%)

Query: 38  LGMAVNLPYILFLIA--LTVAHIFKQSRIAMVAMT--MLLAYWLIQIRLQTPLTVNSTML 93
           +G+  +L Y LFLI+  L +  +F    +  + +   M +A  ++  R+ T   + +   
Sbjct: 56  VGIGGSLVYNLFLISDWLILRDVFAYVAVGRLCLITPMFIALLMLAQRVATRWAMETIAA 115

Query: 94  ELIMLSLLLPVACFL----PYAYKNAGLFSKSFLSYLAILLLFIFWAWLTQLHIGETDHS 149
              ++  L+P+   +    PY               L +LL+ ++   + QL +     +
Sbjct: 116 FATVVCSLMPMLVMIHSDSPY----------QIFYQLGMLLIMVYCTMIQQLPLRHAAVA 165

Query: 150 SLTEGIFFVVPQISRLPLVVVAYLVALAGIAAISVLTRNQILDVVVYSSIVLSMNAFVLF 209
            L               L++      +A  A   +   N +L V   S++ L + A    
Sbjct: 166 MLCM-------------LIIQLVTTYIADFADFVIWQANAVLFV---STVALLLMASYFL 209

Query: 210 HVPYISTIMFTLSGLLILVYLISAGYEMAFNDPLTQIPGRQALDQDLKHIGR-------K 262
                 + +F L G L+ V L+    E A  D LT++  R+  D+ +  +          
Sbjct: 210 ERASRMSYLFALRGRLLQVQLM----EFARTDGLTRLFNRRYQDEVMASVWEHARNAPAN 265

Query: 263 FTLAMLDVDHFKKFNDTYGHDTGDDVLRLVASRLREINGK--ARVYRYGGEEFSIIYKGK 320
             + +LD+DHFK +ND YGH  GD  LRL+  +L++   +  A  +R+GGEE  ++  G 
Sbjct: 266 VAIILLDIDHFKSYNDNYGHPQGDTCLRLLCQKLQQSAHEHGAVAFRFGGEEVLVLMIGD 325

Query: 321 L--AKEVLPFIEALRQDIESYELVIRDTNQRPKSHAEGAKKRSRKSNSDIVTITISIGV- 377
           +  A+EV   +++   +++    V+ +                         +TIS+GV 
Sbjct: 326 VVQAREVAGALQSAVAELKLPHPVLGEN----------------------ALVTISLGVA 363

Query: 378 CDSELYRHPIEALKAADGALYKAKQAGRNCV 408
           C +         + AAD ALY AK+AGRNCV
Sbjct: 364 CATAPLTSAENLIGAADNALYAAKRAGRNCV 394