Pairwise Alignments

Query, 412 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1099 a.a., diguanylate cyclase (GGDEF domain) with PAS/PAC and GAF sensors from Synechococcus elongatus PCC 7942

 Score = 83.2 bits (204), Expect = 4e-20
 Identities = 65/181 (35%), Positives = 95/181 (52%), Gaps = 33/181 (18%)

Query: 241  DPLTQIPGRQAL----DQDL---KHIGRKFTLAMLDVDHFKKFNDTYGHDTGDDVLRLVA 293
            DPLT +  R+ L    +Q+L   K  G    + MLD+D+FK+FND +GHD GD VL+ VA
Sbjct: 912  DPLTGLFNRRYLQEFFEQELARAKRSGDSIGILMLDIDYFKRFNDEFGHDAGDMVLKQVA 971

Query: 294  -SRLREINGKARVYRYGGEEFSIIYKGKLAKEVLPFIEALRQDIESYELVIRDTNQRPKS 352
             + L ++     V R+GGEE +I+  G   +      + +RQ I   +L+I    Q    
Sbjct: 972  RALLNQVRASDVVCRFGGEEIAILMPGASLEVSARKADQIRQAIA--QLIISYHEQ---- 1025

Query: 353  HAEGAKKRSRKSNSDIVTITISIGVC---DSELYRHPIEALKAADGALYKAKQAGRNCVK 409
                           + ++TISIGV    +S L    +  +K+AD +LY+AK AGRNCV 
Sbjct: 1026 --------------TLPSLTISIGVAAFPESGLASDTL--IKSADTSLYQAKAAGRNCVV 1069

Query: 410  V 410
            V
Sbjct: 1070 V 1070