Pairwise Alignments

Query, 412 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., response regulator PleD from Sinorhizobium meliloti 1021

 Score = 89.4 bits (220), Expect = 2e-22
 Identities = 62/186 (33%), Positives = 90/186 (48%), Gaps = 28/186 (15%)

Query: 236 EMAFNDPLTQIPGRQALDQDLKHI-------GRKFTLAMLDVDHFKKFNDTYGHDTGDDV 288
           E+A  D LT +  R+ L+  LK +       GR  ++ + D+D FK+ NDT+GHD GDDV
Sbjct: 288 ELAVTDDLTGLHNRRYLENHLKLLIDRATTRGRPLSICITDIDRFKRVNDTHGHDAGDDV 347

Query: 289 LRLVASRLR-EINGKARVYRYGGEEFSIIYKGKLAKEVLPFIEALRQDIESYELVIRDTN 347
           LR  A+R+R  + G     R+GGEEF ++      +      E LR  +ES    I    
Sbjct: 348 LREFANRVRATVRGADLACRFGGEEFVVVMPDTTPEMAAIVAERLRLAVESRGFDIPQA- 406

Query: 348 QRPKSHAEGAKKRSRKSNSDIVTITISIGVCDSELYRHPIEA-LKAADGALYKAKQAGRN 406
                             + ++ +T S+G+     +    EA LK AD ALY+AK  GRN
Sbjct: 407 ------------------ATVLNVTASLGIATLRPHGDTAEALLKRADMALYQAKNGGRN 448

Query: 407 CVKVAS 412
            V  A+
Sbjct: 449 RVVAAA 454