Pairwise Alignments

Query, 412 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., response regulator receiver protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 82.8 bits (203), Expect = 1e-20
 Identities = 64/228 (28%), Positives = 108/228 (47%), Gaps = 40/228 (17%)

Query: 195 VYSSIVLSMNAFVLFHVPYISTIMFTLSGLLILVYLISAGYE----MAFNDPLTQIPGRQ 250
           +Y ++ L   A +   + +IS I++ ++ + +    +    E    ++  D LTQ+  R+
Sbjct: 109 MYQNVTLLPLASLTGQITHISIIVYDVTDVAVNKLQLKNANERLEHLSQTDGLTQLHNRR 168

Query: 251 ALDQDLKHIGRKF-------TLAMLDVDHFKKFNDTYGHDTGDDVLR----LVASRLREI 299
              + +     +F       +L M D+D FK+ ND +GH  GD V++    L++  LRE 
Sbjct: 169 HWQECMNREYERFNRYGDPVSLVMFDIDRFKQVNDEHGHVAGDKVIQHIAHLLSQSLRET 228

Query: 300 NGKARVYRYGGEEFSIIYKGKLAKEVLPFIEALRQDIESYELVIRDTNQRPKSHAEGAKK 359
           +      RYGGEEF+++  G  A+E   F E LR+ + S  +              G K 
Sbjct: 229 DCAG---RYGGEEFAVVLTGTTAEEAYHFTERLREKVASSAIQF------------GGKS 273

Query: 360 RSRKSNSDIVTITISIGVCD-SELYRHPIEALKAADGALYKAKQAGRN 406
                    + +TIS+G+C   +   +  + L  AD ALY+AKQ GRN
Sbjct: 274 ---------IQVTISLGICGMDDFVDNESQWLACADQALYQAKQQGRN 312