Pairwise Alignments

Query, 412 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 385 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 95.9 bits (237), Expect = 2e-24
 Identities = 111/406 (27%), Positives = 174/406 (42%), Gaps = 89/406 (21%)

Query: 18  LLLVAIWLGLSNVVLVIKSNLGMA----VNLPYILFLIALTVAHIFKQSRIAMVAMTMLL 73
           + +  I + + N+  V+  N G+     V LP++L L    V    ++ R     +T+ L
Sbjct: 45  VFIAVITILVFNLAFVLLGNPGLMYSGLVQLPFLLLLPL--VLWFNRKGRRHEATLTLFL 102

Query: 74  AYWLIQIRLQTPLTVNSTMLELIMLSLLLPVACFLPYAYKNAGLFSKSFLSYLAILLLF- 132
              L  +     +      L L    L+  V   LP +Y +A  +  + L +L+ +LLF 
Sbjct: 103 LVMLDAV--SALMLAQGVTLGLQYYFLMFAV---LPASYLDAKHWPTTLLLFLSNILLFG 157

Query: 133 IFWAWLTQLHIGETDHSSLTEGIFFVVPQISRLPLVVVAYL-VALAGIAAISVLTRNQIL 191
            F  +  Q H                 P I+ +P   +  L + + G  A +VL      
Sbjct: 158 YFEVYGWQAH-----------------PSIAEVPTFTITLLRIIMVGSCATTVLV----- 195

Query: 192 DVVVYSSIVLSMNAFVLFHVPYISTIMFTLSGLLILVYLISAGYEMAFNDPLTQIPGRQA 251
            V++ S    + N   L +                          +A  D LT +P R+A
Sbjct: 196 -VILISEYYAAQNEQELQY--------------------------LADTDSLTGLPNRRA 228

Query: 252 ----LDQDLKHIGRKFTLAMLDVDHFKKFNDTYGHDTGDDVLRLVASRLRE-INGKARVY 306
               L++ +K   R F+L ++DVDHFK+ NDT GH TGD  L+ +A++L   I G+    
Sbjct: 229 FMGRLERTIKD-RRSFSLLIIDVDHFKQINDTTGHQTGDAALQFLANQLNACIQGEDFAG 287

Query: 307 RYGGEEFSIIYKGKLAKEVLPFIEALRQDIESYELVIRDTNQRPKSHAEGAKKRSRKSNS 366
           R GGEEF+++       E L   E+LR+ I S      D    P                
Sbjct: 288 RIGGEEFAMVQFCASPLEHLVRAESLRKTIASAH---PDLGVGP---------------- 328

Query: 367 DIVTITISIGVCDSELYRHPIEALKAADGALYKAKQAGRNCVKVAS 412
             V +T+SIGVC +      I  +  AD ALY+AK++GRNCV+VA+
Sbjct: 329 --VYLTVSIGVCMATPPVSLITLMAMADNALYEAKRSGRNCVQVAA 372