Pairwise Alignments

Query, 412 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 557 a.a., diguanylate cyclase (RefSeq) from Shewanella amazonensis SB2B

 Score = 87.4 bits (215), Expect = 1e-21
 Identities = 60/183 (32%), Positives = 90/183 (49%), Gaps = 28/183 (15%)

Query: 236 EMAFNDPLTQIPGRQALDQDLKHIG------RKFTLAMLDVDHFKKFNDTYGHDTGDDVL 289
           ++A  DPLT I  R+A  + L+ +       R   L M+D+D FK  NDT GH+ GD VL
Sbjct: 396 QLAATDPLTGIANRRAFSEQLQRLWHLDSQRRCRALIMIDIDRFKSINDTLGHEVGDKVL 455

Query: 290 RLVASRLR-EINGKARVYRYGGEEFSIIYKGKLAKEVLPFIEALRQDIESYELVIRDTNQ 348
             +A  +R  I  + +  R+GGEEF ++      +E     E +R +IES          
Sbjct: 456 TDIARVIRYSIRNRDQCGRWGGEEFVVLLASASEEEAGIIAERIRHNIESL--------- 506

Query: 349 RPKSHAEGAKKRSRKSNSDIVTITISIGVCDSELYRHPIEALKAADGALYKAKQAGRNCV 408
                       S  + ++ + +T S+GVC  E +    + L+ AD A+Y AK AG N V
Sbjct: 507 ------------SFPAPANKLKVTASVGVCLDEGHSRHEDILRRADEAMYHAKDAGGNRV 554

Query: 409 KVA 411
           K+A
Sbjct: 555 KLA 557