Pairwise Alignments

Query, 412 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 564 a.a., response regulator (RefSeq) from Shewanella amazonensis SB2B

 Score = 87.4 bits (215), Expect = 1e-21
 Identities = 74/256 (28%), Positives = 117/256 (45%), Gaps = 47/256 (18%)

Query: 176 LAGIAAISVLTRNQILDVVVYSSIVLSMNAFVLFHVPYISTIMFTLS----GLLILVYLI 231
           + G+ A+   +R     +V +S+++L    ++L     +    FT +    G L+ + L+
Sbjct: 332 VVGVMALMKGSRPARFYLVAFSALLLGAFVYMLKSFGVLPHNAFTQNAFQLGSLVEMVLL 391

Query: 232 SAGYEMAFND--------PLTQIPGRQALDQDLKHIGRK-------FTLAMLDVDHFKKF 276
           S        D         LT +  R+  D+ L+    K        +L +LD+D+FK+F
Sbjct: 392 SLALGSRMQDIKRRNHIDVLTGLYNRRFFDEQLQQEYLKACRRHQPLSLLVLDIDYFKQF 451

Query: 277 NDTYGHDTGDDVLRLVASRLR-EINGKARVYRYGGEEFSIIYKGKLAKEVLPFIEALRQD 335
           ND+ GH  GD  L+LVA  L   +       RYGGEEF++I     A E +   E +R  
Sbjct: 452 NDSRGHAEGDKALQLVADILAGTVQKPGMACRYGGEEFALILPETSAGEAMQLAERIR-- 509

Query: 336 IESYELVIRDTNQRPKSHAEGAKKRSRKSNSDIVTITISIGVCDSELYRH--PIEALKAA 393
               E V+RDT +R                   + +T+SIG  + +  +H       +AA
Sbjct: 510 ----EKVVRDTKER-------------------IELTVSIGCSEFDAKQHLSGFALFEAA 546

Query: 394 DGALYKAKQAGRNCVK 409
           D ALY+AK  GRNCV+
Sbjct: 547 DEALYRAKADGRNCVR 562