Pairwise Alignments

Query, 412 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 85.9 bits (211), Expect = 3e-21
 Identities = 58/179 (32%), Positives = 91/179 (50%), Gaps = 35/179 (19%)

Query: 241 DPLTQIPGRQALDQDLKHIGRKFT-------LAMLDVDHFKKFNDTYGHDTGDDVLRLVA 293
           D LTQ+P R AL++ ++   R F        +A+ D+DHFK  ND +GH TGD  L+++A
Sbjct: 360 DTLTQLPNRAALEERMEQEFRSFQRHKHPLWVAVADIDHFKSINDNFGHSTGDKTLQVIA 419

Query: 294 SRLR-EINGKARVYRYGGEEFSIIYKGKLAKEVLPFIEALRQDIESYELVIRDTNQRPKS 352
             L+  +     V RYGGEEF ++       +++  +  +R+ +++  +  +  NQR   
Sbjct: 420 MALKNSLRDTEFVARYGGEEFVLLIPEVSDTDIVQLLNRVREKVKN--IPFKFKNQR--- 474

Query: 353 HAEGAKKRSRKSNSDIVTITISIG---VCDSELYRHPIEALKAADGALYKAKQAGRNCV 408
                           +T+T+SIG   V D+EL     E  + AD ALYKAK   R+ V
Sbjct: 475 ----------------ITVTVSIGAARVMDNELIH---ETFERADAALYKAKHESRDRV 514