Pairwise Alignments

Query, 412 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  101 bits (252), Expect = 2e-26
 Identities = 96/319 (30%), Positives = 155/319 (48%), Gaps = 71/319 (22%)

Query: 122 FLSYLAILLLFIFWAWLTQLHIGETDHSSLTEGIFFVVPQISRLPLV-----VVAYLVAL 176
           ++ YL ++L  ++ A    L++  T+H           PQ+  L L+     V+ +LV +
Sbjct: 11  YIQYLTLILGLLYAA----LYLKWTEHQ----------PQLKHLELLLESVPVLFWLVIM 56

Query: 177 AGIAAISVLTRNQILDVVVYSSIVLSMNAFVLFHVPYIST---------------IMFTL 221
                I  LT + +L   + S  ++S  A ++  +  I+                ++ + 
Sbjct: 57  FSCHYIRHLTYSYVL---LLSGAIISFFASLMDWLDEITVPTEFAFVEDVLQSIGLLLSA 113

Query: 222 SGLLILVY--LISAGY--EMAFNDPLTQIPGRQALDQDLKHIGRKFTLAMLDVDHFKKFN 277
           +GLL+L +  L+      ++A  DPLT    R+A      H G     A++DVDHFK+ N
Sbjct: 114 TGLLLLFHHQLVQQSLLKKIAATDPLTGALNRRAFKAPKTHSGST-VFALVDVDHFKRIN 172

Query: 278 DTYGHDTGDDVL----RLVASRLREINGKARVYRYGGEEFSIIYKGKLAKEVLPFIEALR 333
           DTYGHD GD VL    +L+++ +RE +   + +R+GGEEF + ++     +    +EALR
Sbjct: 173 DTYGHDAGDFVLVELAKLISNHIREDD---QFFRWGGEEFLLEFRQAELAQASKRMEALR 229

Query: 334 QDIESYELVIRDTNQRPKSHAEGAKKRSRKSNSDIVTITISIGV-CDSELYRHPIEALKA 392
           Q +ES             SH           N   + ITIS G+ C S  +    +ALKA
Sbjct: 230 QLVES-------------SHF--------NLNGQAINITISAGLTCVSPNHGGLEKALKA 268

Query: 393 ADGALYKAKQAGRNCVKVA 411
           AD ALY+AK +GRN ++VA
Sbjct: 269 ADEALYRAKDSGRNRIEVA 287