Pairwise Alignments

Query, 412 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., diguanylate cyclase from Pseudomonas sp. BP01

 Score =  199 bits (506), Expect = 1e-55
 Identities = 131/386 (33%), Positives = 206/386 (53%), Gaps = 32/386 (8%)

Query: 44  LPYILFLIALTVAHIFKQSRIAMVAMTMLLAYWLIQIRLQT----PLTVNSTMLELIMLS 99
           LP ++ L+      ++++ R   + +T+ +AY+L+  +               +   ++ 
Sbjct: 42  LPTLVLLLGGAYCAVYRRQRELCMMLTVYIAYYLLDTQTDFYRDHGRVREDAAVIFHLVC 101

Query: 100 LLLPVACFLPYAYKNAGLFSKSFLSYLAILLLF-------------IFWAWLTQLHIGET 146
           LLLP    L  A++      +  ++  A+L                   AWL  +    T
Sbjct: 102 LLLPALFGLYGAWQERTHLLQDMVARGAVLFAVGSVAVALEQSYPEALLAWLADIR-WPT 160

Query: 147 DHSSLTEGIFFVVPQ-ISRLPLVVVAYLVALAGIAAISVLTRNQILDVVVYSSIVLSMNA 205
            H      I  V P  I    L+VV YL A   + A  +     I  ++  +        
Sbjct: 161 LHGQWMSLIQMVYPLFIGVFILLVVQYLRAPRPLHAALITGLLGIFWMLPQT-------- 212

Query: 206 FVLFHVPYISTIMFTLSGLLILVYLISAGYEMAFNDPLTQIPGRQALDQDLKHIGRKFTL 265
              F +P+   IM +   L+I   +    Y+MAF D LT +PGR+AL++ ++ +GR + +
Sbjct: 213 ---FILPFTLNIMCSQVMLMIAAAVAHEAYQMAFRDELTGLPGRRALNERMQRLGRNYVI 269

Query: 266 AMLDVDHFKKFNDTYGHDTGDDVLRLVASRLREINGKARVYRYGGEEFSIIYKGKLAKEV 325
           AM DVDHFKKFNDT+GHD GD VLRLVASRL ++ G  R YRYGGEEF++++ GK A+E 
Sbjct: 270 AMTDVDHFKKFNDTHGHDVGDQVLRLVASRLSKVTGGGRAYRYGGEEFALVFAGKTAEEC 329

Query: 326 LPFIEALRQDIESYELVIRDTNQRPKSHAEGAKKRSRKSNSDIVTITISIGVCDSEL-YR 384
           +P ++A+R+ I +Y + +RD + RP+    G ++R+  S+   V++TISIGV + ++ +R
Sbjct: 330 VPHVQAVREVIANYVMHLRDQSSRPQDDTSGRQRRA-GSSGGTVSVTISIGVAERQVDHR 388

Query: 385 HPIEALKAADGALYKAKQAGRNCVKV 410
           +P   LK+AD ALY AK AGRNCV V
Sbjct: 389 NPEAVLKSADQALYSAKGAGRNCVMV 414