Pairwise Alignments

Query, 412 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 347 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score = 89.4 bits (220), Expect = 2e-22
 Identities = 65/177 (36%), Positives = 86/177 (48%), Gaps = 25/177 (14%)

Query: 241 DPLTQIPGRQALDQD-LKHIGR------KFTLAMLDVDHFKKFNDTYGHDTGDDVLRLVA 293
           D LT +  R+A D++ L HI R        +L ++D+D+FK+FNDT+GH  GD VL  +A
Sbjct: 187 DQLTSLRNRRAFDEEVLGHIQRFRREQRLSSLLLVDIDNFKQFNDTHGHLVGDKVLAYIA 246

Query: 294 SRLRE-INGKARVYRYGGEEFSIIYKGKLAKEVLPFIEALRQDIESYELVIRDTNQRPKS 352
             L++ + G   V RYGGEEF I+         +   E LR  I    L I         
Sbjct: 247 LALKQGVKGDDFVARYGGEEFVILLPDTEHSGAMVVAEQLRARIAERHLSI--------- 297

Query: 353 HAEGAKKRSRKSNSDIVTITISIGVCDSELYRHPIEALKAADGALYKAKQAGRNCVK 409
                    +     +  IT+SIGV    L       L  AD ALY+AK AGRNCVK
Sbjct: 298 --------GKDKKLSLGAITVSIGVATLRLDDDRESYLVRADEALYRAKSAGRNCVK 346