Pairwise Alignments

Query, 412 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score =  102 bits (255), Expect = 1e-26
 Identities = 73/227 (32%), Positives = 114/227 (50%), Gaps = 36/227 (15%)

Query: 195 VYSSIVLSMNAFVLFHVPYISTIMFTLSGLLILVYLISAGYE----MAFNDPLTQIPGRQ 250
           +Y ++ L   + +   + +IS I++ ++ + I    + A  E    ++  D LTQ+  R+
Sbjct: 109 MYQNVTLLPLSSLTGQITHISMIIYDVTDVAINKLQLKAANERLEHLSQTDGLTQLHNRR 168

Query: 251 --------ALDQDLKHIGRKFTLAMLDVDHFKKFNDTYGHDTGDDVLRLVASRLRE-ING 301
                     D+  ++ G   TL M D+DHFK+ NDTYGH  GD V++ V+  LR+ +  
Sbjct: 169 HWQLCMQKEFDRHARY-GEPTTLVMFDIDHFKRINDTYGHIAGDRVIQHVSHILRQSLRD 227

Query: 302 KARVYRYGGEEFSIIYKGKLAKEVLPFIEALRQDIESYELVIRDTNQRPKSHAEGAKKRS 361
                RYGGEEFS++     A+  L F + LR+ IE+ EL                    
Sbjct: 228 TDCAGRYGGEEFSVVLSNTNAEAALHFADRLREKIEASEL-------------------- 267

Query: 362 RKSNSDIVTITISIGVCD-SELYRHPIEALKAADGALYKAKQAGRNC 407
            +  S I+ +T+SIG+C   E   +  + L  AD ALY+AKQ GRNC
Sbjct: 268 -RFESAILKVTVSIGICGIDEHLSNSAQWLGQADSALYQAKQKGRNC 313