Pairwise Alignments

Query, 412 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 591 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Sphingomonas koreensis DSMZ 15582

 Score = 87.0 bits (214), Expect = 1e-21
 Identities = 58/175 (33%), Positives = 85/175 (48%), Gaps = 27/175 (15%)

Query: 238 AFNDPLTQIPGRQALDQDL-----KHIGRKFTLAMLDVDHFKKFNDTYGHDTGDDVLRLV 292
           A  DP+T +  R+A ++ L     +  G   TLA+LD+DHFK  ND  GH  GD  L   
Sbjct: 431 AATDPMTGVLNRRAFERRLSENASREFGHVGTLAVLDLDHFKGVNDRLGHAAGDAALLSF 490

Query: 293 ASRLR-EINGKARVYRYGGEEFSIIYKGKLAKEVLPFIEALRQDIESYELVIRDTNQRPK 351
           A  +R  +  +  + R GGEEF+I++    A   L   E LR+ +E  ++   + N R  
Sbjct: 491 ADLMRANLRSEDAIARLGGEEFAILFPTLSAPAALATCERLRRALERTDIAAAEGNFR-- 548

Query: 352 SHAEGAKKRSRKSNSDIVTITISIGVCDSELYRHPIEALKAADGALYKAKQAGRN 406
                              +T+SIG+   +   H  E ++ AD ALY+AK AGRN
Sbjct: 549 -------------------VTVSIGLAPMQPGIHADELMRRADAALYRAKSAGRN 584