Pairwise Alignments

Query, 412 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 487 a.a., GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 85.5 bits (210), Expect = 3e-21
 Identities = 63/179 (35%), Positives = 81/179 (45%), Gaps = 27/179 (15%)

Query: 238 AFNDPLTQIPGRQALDQDL-------KHIGRKFTLAMLDVDHFKKFNDTYGHDTGDDVLR 290
           A +D LTQ+  R++ D  L       +  G   TL MLD+DHFK  NDTYGH  GD VLR
Sbjct: 313 ADHDALTQLHNRRSFDHRLAEEVDRHQRYGMPMTLLMLDIDHFKAVNDTYGHPAGDAVLR 372

Query: 291 LVASRLRE-INGKARVYRYGGEEFSIIYKGKLAKEVLPFIEALRQDIESYELVIRDTNQR 349
            VA  +R          RYGGEEF +I      K    F E LR+ + S  + +      
Sbjct: 373 EVAQTMRNACRTTDFAARYGGEEFCVILPHTDGKCGRIFAERLRKRLASSRVEV------ 426

Query: 350 PKSHAEGAKKRSRKSNSDIVTITISIGVCDSELYRHPIEALKAADGALYKAKQAGRNCV 408
                           +  VT++I +    +     P   +  ADGALY AK AGRN V
Sbjct: 427 -------------DGKTIAVTVSIGLATLSAAAPLSPERLVCEADGALYAAKAAGRNIV 472