Pairwise Alignments

Query, 412 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score = 86.3 bits (212), Expect = 1e-21
 Identities = 60/180 (33%), Positives = 84/180 (46%), Gaps = 25/180 (13%)

Query: 238 AFNDPLTQIPGRQALDQDLK-HIGR------KFTLAMLDVDHFKKFNDTYGHDTGDDVLR 290
           A  D LT +  R+A +  ++ HI R      + +L ++D+D FK FND YGH  GD VL 
Sbjct: 179 AMTDQLTSLHNRRAYEIAIQDHIHRAEQQHTRCSLLLIDIDRFKVFNDNYGHQVGDKVLA 238

Query: 291 LVASRLRE-INGKARVYRYGGEEFSIIYKGKLAKEVLPFIEALRQDIESYELVIRDTNQR 349
            VA  L++ + G   V RYGGEEF ++       + L   E LR+ I    L I      
Sbjct: 239 YVALALKQCVRGDDFVARYGGEEFVVLLPNTHFHDALQVAETLRERISERRLAI------ 292

Query: 350 PKSHAEGAKKRSRKSNSDIVTITISIGVCDSELYRHPIEALKAADGALYKAKQAGRNCVK 409
                       +     +  IT+SIG+   +           AD ALY+AK  GRNCV+
Sbjct: 293 -----------GKDKKLSLGAITVSIGLASLQEGDDADTLFSRADKALYEAKSDGRNCVR 341