Pairwise Alignments

Query, 412 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score = 97.4 bits (241), Expect = 5e-25
 Identities = 70/228 (30%), Positives = 112/228 (49%), Gaps = 38/228 (16%)

Query: 195 VYSSIVLSMNAFVLFHVPYISTIMFTLSGLLILVYLISAGYE----MAFNDPLTQIPGRQ 250
           +Y ++ L   A +   + +IS I++ ++ + +    + A  E    ++  D LTQ+  R+
Sbjct: 109 MYQNVTLLPLASLTGKITHISVIIYDVTDIAVNKLQLKAANEQLERLSQTDGLTQLHNRR 168

Query: 251 ALDQDLKH-------IGRKFTLAMLDVDHFKKFNDTYGHDTGDDVLRLVASRL-REINGK 302
              Q L+H            +L M+D+DHFK+ NDTYGH  GD V++ +A  L   +   
Sbjct: 169 HWQQCLEHEFDLHARYSGMSSLVMIDIDHFKRINDTYGHVAGDKVIQHIAHILSHSLRET 228

Query: 303 ARVYRYGGEEFSIIYKGKLAKEVLPFIEALRQDIESYELVIRDTNQRPKSHAEGAKKRSR 362
             V RYGGEEF+++       + L F E LR+ I    +V            EG K    
Sbjct: 229 DCVGRYGGEEFAVVMPNTCGADALNFTERLRERIADSTIVY-----------EGLK---- 273

Query: 363 KSNSDIVTITISIGVCDSELYRHPIEA---LKAADGALYKAKQAGRNC 407
                 + +T+S+GVC  E+ +H   +   +  +D ALY+AKQ GRNC
Sbjct: 274 ------IKVTVSLGVC--EIGKHITSSSGWISCSDKALYEAKQKGRNC 313